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Design of photoactivatable metallodrugs: Selective and rapid light-induced ligand dissociation from half-sandwich [Ru([9]aneS3)(N–N′)(py)]2+ complexes

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TLDR
In this paper, the inert Ru(II) half-sandwich coordination compounds, [Ru([9]aneS3)(bpy)(py)][PF6]2, were reported along with the X-ray crystal structure of 1.
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This article is published in Inorganica Chimica Acta.The article was published on 2012-12-01 and is currently open access. It has received 26 citations till now. The article focuses on the topics: Aquation & Coordination complex.

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Visible-to-NIR-Light Activated Release: From Small Molecules to Nanomaterials.

TL;DR: This review comprehensively covers organic and transition metal-containing photoactivatable compounds (complexes) that absorb in the visible- and NIR-range to release various leaving groups and gasotransmitters (carbon monoxide, nitric oxide, and hydrogen sulfide).
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Green light-induced apoptosis in cancer cells by a tetrapyridyl ruthenium prodrug offering two trans coordination sites

TL;DR: Two new photopharmacological ruthenium prodrugs are described that can be activated by green light that are not a consequence of singlet oxygen generation, but of light-induced photosubstitution reactions.
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Synthesis and Biological Evaluation of Organoruthenium Complexes with Azole Antifungal Agents. First Crystal Structure of a Tioconazole Metal Complex

TL;DR: In this paper, the first crystal structure of a tioconazole metal complex as well as the structure of the bis-clotrimazole complex as a hexafluorophosphate salt were reported.
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Photo-induced DNA cleavage and cytotoxicity of a ruthenium(II) arene anticancer complex.

TL;DR: It is demonstrated that when photoactivated by UVA or visible light, 1 efficiently photocleaves DNA, also in hypoxic media, and the mechanism of DNA photocleavage by 1 appears to involve a direct modification of mainly those guanine residues to which 1 is coordinatively bound.
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Photosolvolysis of cis-[Ru(α-diimine)2(4-aminopyridine)2](2+) complexes: photophysical, spectroscopic, and density functional theory analysis.

TL;DR: Density functional theory (DFT) and time-dependent DFT analysis of singlet and triplet excited states facilitated the understanding of the photochemical behavior of the cis-[Ru(II)(α-diimine)2(4-APy)2](2+) complexes.
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UCSF Chimera--a visualization system for exploratory research and analysis.

TL;DR: Two unusual extensions are presented: Multiscale, which adds the ability to visualize large‐scale molecular assemblies such as viral coats, and Collaboratory, which allows researchers to share a Chimera session interactively despite being at separate locales.
Journal ArticleDOI

Phase annealing in SHELX-90: direct methods for larger structures

TL;DR: In this article, a phase annealing method, related to the simulated-annealing approach in other optimization problems, is proposed and it is shown that it can result in an improvement of up to an order of magnitude in the chances of solving large structures at atomic resolution.
Journal ArticleDOI

Toward reliable density functional methods without adjustable parameters: The PBE0 model

TL;DR: In this paper, an analysis of the performances of a parameter free density functional model (PBE0) obtained combining the so-called PBE generalized gradient functional with a predefined amount of exact exchange is presented.
Journal ArticleDOI

Ab initio effective core potentials for molecular calculations. Potentials for the transition metal atoms Sc to Hg

TL;DR: In this article, the Coulomb, exchange, and core-orthogonality effects of the chemically inert core electron in the transition metal atoms Sc to Hg have been replaced by the ab initio effective core potentials (ECP).
Journal ArticleDOI

Contracted Gaussian basis sets for molecular calculations. I. Second row atoms, Z=11–18

TL;DR: In this article, the contracted Gaussian basis sets for molecular calculations are derived from uncontracted (12,8) and ( 12,9) sets for the neutral second row atoms, Z=11-18, and for the negative ions P−, S−, and Cl−.
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Q1. What are the contributions in "Design of photoactivatable metallodrugs: selective and rapid light-induced ligand dissociation from half-" ?

The synthesis of the inert Ru ( II ) half-sandwich coordination compounds, [ Ru ( [ 9 ] aneS3 ) ( bpy ) ( py ) ] [ PF6 ] 2 ( 1, [ 9 ] aneS3 = 1,4,7-trithiacyclononane ), [ Ru ( [ 9 ] aneS3 ) ( en ) ( py ) ] [ PF6 ] 2 ( 2, en = 1,2-diaminoethane ), and [ Ru ( [ 9 ] aneN3 ) ( en ) ( dmsoS ) ] [ PF6 ] 2 ( 3, [ 9 ] aneN3 = 1,4,7-triazacyclononane ), is reported along with the X-ray crystal structure of 1. The authors investigated whether these complexes have photochemical properties which might make them suitable for use as pro-drugs in photochemotherapy. 2+. Density functional theory ( DFT ) calculations and time-dependent DFT reproduced the major features of the absorption spectra and suggested that the lowest-lying triplet state with 3 MLCT character, which is readily accessible via intersystem crossing, might be responsible for the 

The aim of this work was to study the photochemistry of some Ru ( II ) half-sandwich coordination compounds, structurally similar to the inert organometallic compounds of general formula [ ( η 6 -arene ) Ru ( N, N ) ( L ) ] These interesting properties of 1 prompted us to extend their studies on this compound. In the future the authors plan to perform in vitro antiproliferative tests on compounds 1 and 2, and their analogues, both in the dark and upon photo-irradiation, in order to assess if the photoactivation and reactivity observed in the test-tube leads to cytotoxicity towards cancer cells. 2+ developed in recent years by Sadler and coworkers, that can be activated by photo-induced dissociation of the monodentate ligand upon irradiation with visible light. 

After 180 min under light excitation (when 100% py dissociation had occurred), 2-G accounted for ca. 56% of the total complex in solution, while with 135 min of irradiation and incubation at 37 °C overnight only a small fraction of 3-G (ca. 7%) was formed. 

The irradiation of the tumor site with a light source would lead to the release of active metal fragments directly into cancer cells [3]. 

As light source, a broadband visible light lamp (16 tubes, model LZC420; Luzchem research inc., Ottawa, Canada), operating with a maximum output at 420 nm and a maximum power of ca. 20 mW/cm 2 was used. 

Also the nature of the chelating ligand has a strong impact on the photoactivation rate (cf. 1 with 2), possibly because there is a marked increase in the absorbance at the irradiation wavelength when the bpy aromatic system replaces 1,2- diaminoethane. 

In the presence of 9-EtG both complexes were stable in the dark at 37 °C (overnight), and underwent photoreaction to give the corresponding aqua derivatives and subsequent coordination of the nucleobase. 

Spectra were recorded at 310 K in deionized water from 200 to 800 nm and were processed using Cary WinUV software for Windows XP and OriginPro8.1.HPLC 

As demonstrated by the 9-EtG binding experiment, it is likely that 1a binds first at the single guanine residue, as the N7 of guanine is usually the preferred DNA site for transition metal ions [20]. 

Provided that activation occurs selectively, this strategy would have the clear advantage of limiting the undesired effects of the drug, thus increasing its therapeutic index. 

triplet states are generally involved in the photochemistry of ruthenium complexes since they become efficiently populated after intersystem crossing (ISC). 

A singlet at = 2.72 corresponding to freedmso progressively increased in intensity, while the peak of the coordinated dmso-S at = 3.33 decreased in intensity, indicating the formation of [Ru([9]aneN3)(en)(H2O)] 

Given the relevance of glutathione (γ-L-Glu-L-Cys-Gly, GSH) – the abundant intracellular tripeptide – as metal detoxification agent [19], its interaction with 1 was studied by 1 H-NMR spectroscopy (PBS, pH 7.2) both in the dark and under light irradiation (Fig. 4). 

The concentration of free dmso increased during the first two hours of irradiation, eventually reaching a plateau corresponding to the formation of ca. 23% 3a. 

In the case of 1, DFT calculations show that, dissociative 3 MC (d–d ligand field) states are accessible and can promote specific photodissociation of the pyridine ligand. 

Compound 1 was dissolved in water and mixed with the oligonucleotide d(ATACATGCTACATA) in a 1:1 mol ratio (final concentration of 250 µM). 

In the experimental spectrum, the lowest-energy band is centered at 399 nm (ε = 3286 M –1 cm –1 ) and has a MLCT character as shown by the electron density difference map (EDDM) S1. 

1 H-NMR shows that in the photolyzed solution the reverse binding of pyridine to 1a is very slow and not quantitative (see below). 

there are weak transitions in the 350nm region (calculated) that have a dissociative MC character because of significant contributions from the σ-antibonding orbitals LUMO+4 and LUMO+5 (e. g. S4, Table S1).