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DNA damage sensing by the ATM and ATR kinases.

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TLDR
The recent findings and current models of how ATM and ATR senseDNA damage, how they are activated by DNA damage, and how they function in concert to regulate the DDR are discussed.
Abstract
In eukaryotic cells, maintenance of genomic stability relies on the coordinated action of a network of cellular processes, including DNA replication, DNA repair, cell-cycle progression, and others. The DNA damage response (DDR) signaling pathway orchestrated by the ATM and ATR kinases is the central regulator of this network in response to DNA damage. Both ATM and ATR are activated by DNA damage and DNA replication stress, but their DNA-damage specificities are distinct and their functions are not redundant. Furthermore, ATM and ATR often work together to signal DNA damage and regulate downstream processes. Here, we will discuss the recent findings and current models of how ATM and ATR sense DNA damage, how they are activated by DNA damage, and how they function in concert to regulate the DDR.

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Journal ArticleDOI

DNA Damage/Repair Management in Cancers

TL;DR: The relationship between DNA damage/repair mechanisms and cancer, and how the authors can target these pathways are discussed.
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Trial Watch: Targeting ATM–CHK2 and ATR–CHK1 pathways for anticancer therapy

TL;DR: The roles of the ATM- CHK2 and ATR-CHK1 pathways in cancer initiation and progression are overviewed, and the results of clinical studies aimed at assessing the safety and therapeutic profile of regimens based on inhibitors of ATR and CHK1, the only 2 classes of compounds that have so far entered clinics are summarized.
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DNA damage checkpoint kinases in cancer

TL;DR: This review will focus on the ATM- CHK2-p53-p21 pathway and the ATR-CHK1-WEE1 pathway and ongoing efforts to target these pathways for patient benefit.
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The Plant DNA Damage Response: Signaling Pathways Leading to Growth Inhibition and Putative Role in Response to Stress Conditions.

TL;DR: This review summarizes the acquired knowledge and recent advances regarding the DDR control of cell cycle progression in plants and discusses the recent findings connecting the plant DDR to responses to biotic and abiotic stresses.
Journal ArticleDOI

Impact of the gut microbiome on the genome and epigenome of colon epithelial cells: contributions to colorectal cancer development

TL;DR: The impact of gut microbes on the genome and epigenome of CECs, as it relates to CRC is reviewed to better assess these effects, understand their functional relevance, and leverage this information to improve patient care.
References
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Journal ArticleDOI

The DNA Damage Response: Making It Safe to Play with Knives

TL;DR: This review will focus on how the DDR controls DNA repair and the phenotypic consequences of defects in these critical regulatory functions in mammals.
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DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation

TL;DR: It is shown that ATM is held inactive in unirradiated cells as a dimer or higher-order multimer, with the kinase domain bound to a region surrounding serine 1981 that is contained within the previously described ‘FAT’ domain.
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The DNA damage response: putting checkpoints in perspective

TL;DR: The inability to repair DNA damage properly in mammals leads to various disorders and enhanced rates of tumour development, and this work has shown that direct activation of DNA repair networks is needed to correct this problem.
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ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage

TL;DR: A large-scale proteomic analysis of proteins phosphorylated in response to DNA damage on consensus sites recognized by ATM and ATR is performed and more than 900 regulated phosphorylation sites encompassing over 700 proteins are identified.
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Sensing DNA Damage Through ATRIP Recognition of RPA-ssDNA Complexes

TL;DR: The data suggest that RPA-coated ssDNA is the critical structure at sites of DNA damage that recruits the ATR-ATRIP complex and facilitates its recognition of substrates for phosphorylation and the initiation of checkpoint signaling.
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