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Open AccessJournal ArticleDOI

Exploiting bacterial DNA gyrase as a drug target: current state and perspectives.

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TLDR
Known gyrase-specific drugs and toxins are reviewed and the prospects for developing new antibacterials targeted to this enzyme are assessed.
Abstract
DNA gyrase is a type II topoisomerase that can introduce negative supercoils into DNA at the expense of ATP hydrolysis. It is essential in all bacteria but absent from higher eukaryotes, making it an attractive target for antibacterials. The fluoroquinolones are examples of very successful gyrase-targeted drugs, but the rise in bacterial resistance to these agents means that we not only need to seek new compounds, but also new modes of inhibition of this enzyme. We review known gyrase-specific drugs and toxins and assess the prospects for developing new antibacterials targeted to this enzyme.

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Strategies for combating bacterial biofilms: A focus on anti-biofilm agents and their mechanisms of action

TL;DR: The molecules considered here might be used to treat biofilm-associated infections after significant structural modifications, thereby investigating its effective delivery in the host and minimum effective concentration must be capable of eradicating biofilm infections with maximum potency without posing any adverse side effects on the host.
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Topoisomerases as anticancer targets

TL;DR: Topoisomerases remain as important therapeutic targets of anticancer agents and a possibility of designing isoform-specific human topoisomerase II poisons, which may be developed as safer anticancer drugs is suggested.
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Gut microbiota as a source of novel antimicrobials

TL;DR: Some of the antimicrobial compounds that are produced by bacteria isolated from the gut environment, with a special focus on bacteriocins are summarized and the potential therapeutic application of these compounds to maintain homeostasis in the gut and the biocontrol of pathogenic bacteria is evaluated.
Journal ArticleDOI

Structure-based discovery of substituted 4,5'-bithiazoles as novel DNA gyrase inhibitors.

TL;DR: A novel series of 4'-methyl-N(2)-phenyl-[4,5'-bithiazole]-2,2'-diamine inhibitors of gyrase B with a low micromolar inhibitory activity is identified by implementing a two-step structure-based design procedure.
Journal ArticleDOI

YcaO-Dependent Posttranslational Amide Activation: Biosynthesis, Structure, and Function

TL;DR: The formerly enigmatic YcaO superfamily (DUF181), has been found to catalyze a unique phosphorylation of a ribosomal peptide backbone amide upon attack by different nucleophiles.
References
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Journal ArticleDOI

The intrinsic ATPase of DNA gyrase.

TL;DR: It is concluded that gyrase contains an intrinsic, DNA-dependent, ATPase, which is relatively insensitive to oxolinic acid, a good inhibitor of supercoiling, whereas novobiocin inhibits both processes equally.
Book ChapterDOI

Mechanisms of quinolone resistance

TL;DR: In this paper, the authors summarized the current understanding of established mechanisms of resistance to this class of antimicrobial agents in gram-positive bacteria and suggested the involvement of an efflux system(s) in quinolone resistance.
Journal ArticleDOI

Mutations in DNA gyrase result in novobiocin resistance in halophilic archaebacteria.

TL;DR: A cloning vector for use in halophilic archaebacteria which has a novobiocin resistance determinant as a selectable marker is developed and three mutations were identified in the GyrB protein of the resistant mutant compared with the wild type which together enable Haloferax cells to grow in concentrations of novobocin some 1,000 times higher than that possible for cells carrying only the wild-type enzyme.
Journal ArticleDOI

Structural insights into the quinolone resistance mechanism of Mycobacterium tuberculosis DNA gyrase.

TL;DR: Interestingly, the structure of the entire breakage-reunion domain revealed a new interaction, in which the Quinolone-Binding Pocket (QBP) is blocked by the N-terminal helix of a symmetry-related molecule, which provides useful starting points for designing peptide based inhibitors that target DNA gyrase to prevent its binding to DNA.
Journal ArticleDOI

Mechanism of action of the antibiotic NXL101, a novel nonfluoroquinolone inhibitor of bacterial type II topoisomerases.

TL;DR: NXL101 inhibited topoisomerase IV more effectively than gyrase from Escherichia coli, whereas the converse is true of enzymes from Staphylococcus aureus, indicating apparent target preference is opposite to that which is associated with most fluoroquinolone antibiotics.
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