Genetic and functional characterization of clonally derived adult human brown adipocytes
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Citations
Adipose Tissue Remodeling: Its Role in Energy Metabolism and Metabolic Disorders.
Brown and Beige Fat: Physiological Roles beyond Heat Generation.
A Creatine-Driven Substrate Cycle Enhances Energy Expenditure and Thermogenesis in Beige Fat
Adipose Tissue Distribution, Inflammation and Its Metabolic Consequences, Including Diabetes and Cardiovascular Disease.
UCP1-independent signaling involving SERCA2b-mediated calcium cycling regulates beige fat thermogenesis and systemic glucose homeostasis.
References
Statistical Power Analysis for the Behavioral Sciences
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
TM4: a free, open-source system for microarray data management and analysis.
Identification and Importance of Brown Adipose Tissue in Adult Humans
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Frequently Asked Questions (9)
Q2. How were the beige cell lines used for the analysis?
Among 13 putative beige cell lines, three lines were used for their bioinformatics analysis since they were functionally validated by oxygen consumption assays, cell transplantation experiments, or UCP1 protein expression by western blotting.
Q3. Who performed the RNA-seq and library constructions?
RNA-seq and library constructions were performed by technical staff at the UCSF genome core who were blinded to the experimental groups.
Q4. How many human brown adipocytes were identified from the clustering analysis?
Thirty-six representative human brown adipocyte–enriched genes were identified from the clustering analysis and further selected based on the additional criteria in which mRNA expression levels were high (averaged FPKM > 2.0) in differentiated human brown adipocytes and consistent among the three independent clonal cell lines (relative s.d. of FPFM < 1.0).
Q5. How was the dose of CL-316,243 administered?
Mice were intraperitoneally injected daily with 0.9% saline or beta3-adrenergic receptor-specific agonist CL-316,243 (Sigma) at a dose of 1 mg/kg for 7 d.
Q6. How many clonally immortalized adipocyte lines did the authors find?
To this end, the authors have isolated a total of 65 clonally immortalized preadipocyte lines from stromal vascular fractions (SVFs) obtained from UCP1-positive supraclavicular BAT biopsies of two non-obese individuals20.
Q7. How does the present study show that BAT is recruitable?
The present study together with previous reports8,16,18,19,31–33 strongly indicates that adult human BAT is recruitable in response to physiological external cues such as chronic cold exposure.
Q8. How can these cells be used to identify novel regulators of human BAT thermogenesis?
These cells can also be applied to cell-based small-molecule screenings or unbiased RNAi screenings to identify novel regulators of human BAT thermogenesis.
Q9. How many pairs of adipose tissue were analyzed?
(e) Gene expression of MTUS1 and KCNK3 in UCP1-positive adipose tissues (BAT) and UCP1-negative adipose tissues (WAT) from the neck region of the same individuals (eight pairs).