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Open AccessJournal ArticleDOI

Hepatitis C virus NS5A: enigmatic but still promiscuous 10 years on!

Douglas Ross-Thriepland, +1 more
- 01 Apr 2015 - 
- Vol. 96, Iss: 4, pp 727-738
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TLDR
This review will describe advances in the understanding of NS5A biology over the past decade, highlighting how the JFH-1 system has allowed us to determine thatNS5A is essential not only in genome replication but also in the assembly of infectious virions.
Abstract
Since one of us co-authored a review on NS5A a decade ago, the hepatitis C virus (HCV) field has changed dramatically, primarily due to the advent of the JFH-1 cell culture infectious clone, which allowed the study of all aspects of the virus life cycle from entry to exit. This review will describe advances in our understanding of NS5A biology over the past decade, highlighting how the JFH-1 system has allowed us to determine that NS5A is essential not only in genome replication but also in the assembly of infectious virions. We shall review the recent structural insights - NS5A is predicted to comprise three domains; X-ray crystallography has revealed the structure of domain I but there is a lack of detailed structural information about the other two domains, which are predicted to be largely unstructured. Recent insights into the phosphorylation of NS5A will be discussed, and we shall highlight a few pertinent examples from the ever-expanding list of NS5A-binding partners identified over the past decade. Lastly, we shall review the literature showing that NS5A is a potential target for a new class of highly potent small molecules that function to inhibit virus replication. These direct-acting antivirals (DAAs) are now either licensed, or in the late stages of approval for clinical use both in the USA and in the UK/Europe. In combination with other DAAs targeting the viral protease (NS3) and polymerase (NS5B), they are revolutionizing treatment for HCV infection.

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Citations
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Journal ArticleDOI

Direct-acting antiviral agents for hepatitis C: structural and mechanistic insights

TL;DR: A mechanistic description of NS3/4A protease inhibitors, nucleotide and non-nucleotide inhibitors of the NS5B viral polymerase and inhibitors ofThe NS5A protein is provided, followed by a summary of clinical data from studies of each drug class alone and in combination.
Journal ArticleDOI

Application of NMR to studies of intrinsically disordered proteins

TL;DR: The many ways in which NMR has advanced the authors' understanding of the physical-chemical phase space occupied by disordered protein regions are explored and a prospectus for the future role of NMR in this emerging and exciting field is provided.
Journal ArticleDOI

NS5A Domain 1 and Polyprotein Cleavage Kinetics Are Critical for Induction of Double-Membrane Vesicles Associated with Hepatitis C Virus Replication

TL;DR: This study dissected the determinants within NS5A responsible for DMV formation and found that RNA-binding domain 1 (D1) and the amino-terminal membrane anchor are indispensable for this process, and identifies determinants in the HCV replicase that are required for DMV biogenesis.
Journal ArticleDOI

The role of ZAP and OAS3/RNAseL pathways in the attenuation of an RNA virus with elevated frequencies of CpG and UpA dinucleotides.

TL;DR: It is reported that ZAP similarly mediates antiviral restriction against echovirus 7 (E7) mutants with elevated frequencies of UpA dinucleotides and dependence on expression of ZAP, OAS3 and RNAseL for CpG/UpA-mediated attenuation and the variable and often low level expression of these pathway proteins in certain cell types.
Journal ArticleDOI

Medicinal chemistry strategies for discovering antivirals effective against drug-resistant viruses

TL;DR: In this article, the authors discuss strategies to discover antiviral compounds specifically designed to combat drug resistance, which can contribute to the discovery of new drugs effective against emerging and re-emerging viral pandemics.
References
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Journal ArticleDOI

Replication of Subgenomic Hepatitis C Virus RNAs in a Hepatoma Cell Line

TL;DR: This work defines the structure of HCV replicons functional in cell culture and provides the basis for a long-sought cellular system that should allow detailed molecular studies ofHCV and the development of antiviral drugs.
Journal ArticleDOI

Production of infectious hepatitis C virus in tissue culture from a cloned viral genome

TL;DR: It is shown that the JFH1 genome replicates efficiently and supports secretion of viral particles after transfection into a human hepatoma cell line (Huh7) and provides a powerful tool for studying the viral life cycle and developing antiviral strategies.
Journal ArticleDOI

Efficient initiation of HCV RNA replication in cell culture.

TL;DR: This work establishes a robust, cell-based system for genetic and functional analyses of HCV replication and identifies multiple independent adaptive mutations that cluster in the HCV nonstructural protein NS5A and confer increased replicative ability in vitro.
Journal ArticleDOI

Chemical genetics strategy identifies an HCV NS5A inhibitor with a potent clinical effect

TL;DR: These results provide the first clinical validation of an inhibitor of HCV NS5A, a protein with no known enzymatic function, as an approach to the suppression of virus replication that offers potential as part of a therapeutic regimen based on combinations ofHCV inhibitors.
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