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Journal ArticleDOI

Improvement of N-glycan site occupancy of therapeutic glycoproteins produced in Pichia pastoris

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TLDR
The results suggest that the glycosylation status of recombinant proteins can be improved by heterologous STT3 expression, which will allow for the customization of therapeutic protein profiles.
Abstract
Yeast is capable of performing posttranslational modifications, such as N- or O-glycosylation. It has been demonstrated that N-glycans play critical biological roles in therapeutic glycoproteins by modulating pharmacokinetics and pharmacodynamics. However, N-glycan sites on recombinant glycoproteins produced in yeast can be underglycosylated, and hence, not completely occupied. Genomic homology analysis indicates that the Pichia pastoris oligosaccharyltransferase (OST) complex consists of multiple subunits, including OST1, OST2, OST3, OST4, OST5, OST6, STT3, SWP1, and WBP1. Monoclonal antibodies produced in P. pastoris show that N-glycan site occupancy ranges from 75–85 % and is affected mainly by the OST function, and in part, by process conditions. In this study, we demonstrate that N-glycan site occupancy of antibodies can be improved to greater than 99 %, comparable to that of antibodies produced in mammalian cells (CHO), by overexpressing Leishmania major STT3D (LmSTT3D) under the control of an inducible alcohol oxidase 1 (AOX1) promoter. N-glycan site occupancy of non-antibody glycoproteins such as recombinant human granulocyte macrophage colony-stimulating factor (rhGM-CSF) was also significantly improved, suggesting that LmSTT3D has broad substrate specificity. These results suggest that the glycosylation status of recombinant proteins can be improved by heterologous STT3 expression, which will allow for the customization of therapeutic protein profiles.

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Journal ArticleDOI

Microbials for the production of monoclonal antibodies and antibody fragments

TL;DR: Glycosylated full length antibodies are currently produced in mammalian cells but can be produced in microbial organisms and microbials provide several advantages over mammalian cells.
Journal ArticleDOI

New opportunities by synthetic biology for biopharmaceutical production in Pichia pastoris

TL;DR: The application of Pichia pastoris for biopharmaceutical production is described and the molecular toolbox available for synthetic biology in P. pastoris is discussed.
Journal ArticleDOI

Proteomic analysis of fatty-acylated proteins in mammalian cells with chemical reporters reveals S-acylation of histone H3 variants

TL;DR: The unbiased proteomic analysis of fatty-acylated proteins using chemical reporters has revealed a greater diversity of lipid-modified proteins in mammalian cells and identified a novel post-translational modification of histones.
Journal ArticleDOI

Quo vadis? The challenges of recombinant protein folding and secretion in Pichia pastoris

TL;DR: This work focuses on recent developments of characterization and improvement of P. pastoris production strains regarding protein folding, intracellular trafficking, glycosylation and proteolytic degradation.
Journal ArticleDOI

Temporal changes in milk proteomes reveal developing milk functions.

TL;DR: This report analyzed the proteomes of whey from human transitional and mature milk using ion-exchange and SDS-PAGE based protein fractionation methods, and found that immunoglobulins sIgA and IgM are more abundant in transitional milk, whereas IgG isMore abundant in mature milk, suggesting a transformation in defense mechanism from newborns to young infants.
References
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Journal ArticleDOI

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

TL;DR: A new membrane protein topology prediction method, TMHMM, based on a hidden Markov model is described and validated, and it is discovered that proteins with N(in)-C(in) topologies are strongly preferred in all examined organisms, except Caenorhabditis elegans, where the large number of 7TM receptors increases the counts for N(out)-C-in topologies.
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Multiple sequence alignment with the Clustal series of programs

TL;DR: The Clustal series of programs, widely used in molecular biology for the multiple alignment of both nucleic acid and protein sequences and for preparing phylogenetic trees, are extended.
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Heterologous protein expression in the methylotrophic yeast Pichia pastoris

TL;DR: This paper reviews the P. pastoris expression system: how it was developed, how it works, and what proteins have been produced and describes new promoters and auxotrophic marker/host strain combinations which extend the usefulness of the system.
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Humanization of Yeast to Produce Complex Terminally Sialylated Glycoproteins

TL;DR: Yeast is a widely used recombinant protein expression system expanded by engineering the yeast Pichia pastoris to secrete human glycoproteins with fully complex terminally sialylated N-glycans, allowing it to replicate the sequential steps of human glycosylation.
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