Isolation and Characterization of a myo-inositol-1-phosphate Synthase Gene from Yellow Passion Fruit (Passiflora edulis f. flavicarpa) Expressed During Seed Development and Environmental Stress
TLDR
Experimental data suggest that PeMIPS1 transcription plays an important role in the establishment of developmental programmes and during the response of plants to environmental changes, suggesting that it is important for environmental stress response.About:
This article is published in Annals of Botany.The article was published on 2007-02-01 and is currently open access. It has received 66 citations till now. The article focuses on the topics: Gene expression & Complementary DNA.read more
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Citrus Functional Genomics and Molecular Modeling in Relation to Citrus sinensis (Sweet Orange) Infection with Xylella fastidiosa (Citrus Variegated Chlorosis).
Upendra N. Dwivedi,Sameeksha Tiwari,Pragya Prasanna,Manika Awasthi,Swati Singh,Veda P. Pandey +5 more
TL;DR: For the first time, SNPs in the EST data sets of X. fastidiosa-infected Citrus sinensis are reported and their functional annotation revealed the involvement of eight C. sinensis candidate genes in CVC pathogenesis, suggesting a decrease in the catalytic efficiency of these enzymes during infection, thereby facilitating a favorable condition for infection by the pathogen.
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Characterization of myo-inositol-1-phosphate synthase (MIPS) gene expression and phytic acid accumulation in oat (Avena sativa) during seed development
TL;DR: In this article, the authors examined the relationship between the expression of MIPS and the accumulation of phytic acid in developing oat seeds by using three consensus primers which were designed from highly conserved regions in the MIPS sequence from other plants.
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Genome‐wide characterization of aquaporins in Spirodela polyrhiza and expression of aquaporin gene family under high‐temperature stress
TL;DR: In this paper , gene sequences, gene structure, phylogeny, conserved motif and promoter of the AQP genes in Spirodela polyrhiza were investigated to explore the mechanisms of osmoregulation underwater.
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Lipid peroxidation and seed emergency in progenies of the yellow passion fruit plant 1
João Paulo,Bestete de Oliveira,Rodrigo Sobreira Alexandre,Jacson Rondinelli Da Silva,José Carlos Lopes,Claudio Horst Bruckner +5 more
TL;DR: A remarkable genetic variability for vigor and emergency of the yellow passion fruit plantlets is pointed out, with occurrence of individuals with high and other ones with low capacity to maintaining the physiologic quality of their seeds after storage.
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Sequence analysis of MIPS-1s gene isolated from the low-phytic-acid inbred line of maize Qi319 and characterization of its expression patterns.
Qing-Hua Gao,Cui Zhang,Wei Fan,Dong-Dong Niu,Rong Ruijuan,Xuejiao Li,Liu-Yang Miao,Lijuan Liu,Guozhen Liu +8 more
TL;DR: It was found that the control line had a dramatically higher abundance of MIPS-1s protein than did Qi319, in the developing seeds and especially during the early period, which strongly indicates that higher levels ofMIPS expression should precede and/or accompany synthesis and accumulation of phytate.
References
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Clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
TL;DR: The sensitivity of the commonly used progressive multiple sequence alignment method has been greatly improved and modifications are incorporated into a new program, CLUSTAL W, which is freely available.
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Naruya Saitou,Masatoshi Nei +1 more
TL;DR: The neighbor-joining method and Sattath and Tversky's method are shown to be generally better than the other methods for reconstructing phylogenetic trees from evolutionary distance data.
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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.
TL;DR: Some examples were worked out using reported globin sequences to show that synonymous substitutions occur at much higher rates than amino acid-altering substitutions in evolution.
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MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
TL;DR: An overview of the statistical methods, computational tools, and visual exploration modules for data input and the results obtainable in MEGA is provided.
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Predicting subcellular localization of proteins based on their N-terminal amino acid sequence.
TL;DR: A neural network-based tool, TargetP, for large-scale subcellular location prediction of newly identified proteins has been developed and it is estimated that 10% of all plant proteins are mitochondrial and 14% chloroplastic, and that the abundance of secretory proteins, in both Arabidopsis and Homo, is around 10%.