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Loss of function of the IAA-glucose hydrolase gene TGW6 enhances rice grain weight and increases yield

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TLDR
The cloning and functional analysis of THOUSAND-GRAIN WEIGHT 6 (TGW6), a gene from the Indian landrace rice Kasalath, suggest that TGW6 may be useful for further improvements in yield characteristics in most cultivars.
Abstract
Increases in the yield of rice, a staple crop for more than half of the global population, are imperative to support rapid population growth. Grain weight is a major determining factor of yield. Here, we report the cloning and functional analysis of THOUSAND-GRAIN WEIGHT 6 (TGW6), a gene from the Indian landrace rice Kasalath. TGW6 encodes a novel protein with indole-3-acetic acid (IAA)-glucose hydrolase activity. In sink organs, the Nipponbare tgw6 allele affects the timing of the transition from the syncytial to the cellular phase by controlling IAA supply and limiting cell number and grain length. Most notably, loss of function of the Kasalath allele enhances grain weight through pleiotropic effects on source organs and leads to significant yield increases. Our findings suggest that TGW6 may be useful for further improvements in yield characteristics in most cultivars.

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Transcriptome analysis of near-isogenic line provides novel insights into genes associated with panicle traits regulation in rice.

TL;DR: It is determined that the pleiotropic gene OsGRF4 may also be involve in abiotic stress resistance, and new candidates genes are provided for further understanding the molecular mechanisms underlying rice panicle trait regulation.
Journal ArticleDOI

Comparison and analysis of QTLs for grain and hull thickness related traits in two recombinant inbred line (RIL) populations in rice (Oryza sativa L.)

TL;DR: A comparison of QTLs for grain traits in two different genetic backgrounds recombinant inbred line populations confirmed that genetic background had a significant impact on grain traits.
Journal ArticleDOI

A novel and pleiotropic factor SLENDER GRAIN3 is involved in regulating grain size in rice.

TL;DR: A mutant named as SLENDER GRAIN3 (sg3) was identified from cultivar Zhenong 41 and Histological analysis showed that the slender grain of sg3 mutant resulted from increased cell division longitudinally and decreased cell division horizontally.
Journal ArticleDOI

Genome-wide association study on agronomic traits of temperate japonica rice (Oryza sativa L.)

TL;DR: In this paper, a set of 191 temperate japonica accessions from 30 countries were planted in two sites in China, and 12 agronomic traits were measured, and the results showed a wide range of variation for the traits measured.
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Genetic Analysis of Leaf Traits in Small-Flower Chrysanthemum (Chrysanthemum × morifolium Ramat.)

TL;DR: The results showed that the leaf traits were mainly controlled by genetic factors, which may establish a theoretical foundation for the in-depth exploration of leaf-shape-related genes in chrysanthemum and may provide a reference for future research investigating leaf- shape genetics in other agronomic crops.
References
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Journal ArticleDOI

PROCHECK: a program to check the stereochemical quality of protein structures

TL;DR: The PROCHECK suite of programs as mentioned in this paper provides a detailed check on the stereochemistry of a protein structure and provides an assessment of the overall quality of the structure as compared with well refined structures of the same resolution.
Journal ArticleDOI

Validation of the general purpose Tripos 5.2 force field

TL;DR: In this paper, a molecular mechanics force field implemented in the Sybyl program is described along with a statistical evaluation of its efficiency on a variety of compounds by analysis of internal coordinates and thermodynamic barriers.
Journal ArticleDOI

Seed Banks and Molecular Maps: Unlocking Genetic Potential from the Wild

TL;DR: The tools of genome research may finally unleash the genetic potential of the authors' wild and cultivated germplasm resources for the benefit of society.
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