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Phosphoregulation of the autophagy machinery by kinases and phosphatases.

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TLDR
In this paper, the authors summarize the current knowledge on kinases and phosphatases acting on the core autophagy machinery and discuss the relevance of phosphoregulation for the overall process of autophagocytosis.
Abstract
Eukaryotic cells use post-translational modifications to diversify and dynamically coordinate the function and properties of protein networks within various cellular processes. For example, the process of autophagy strongly depends on the balanced action of kinases and phosphatases. Highly conserved from the budding yeast Saccharomyces cerevisiae to humans, autophagy is a tightly regulated self-degradation process that is crucial for survival, stress adaptation, maintenance of cellular and organismal homeostasis, and cell differentiation and development. Many studies have emphasized the importance of kinases and phosphatases in the regulation of autophagy and identified many of the core autophagy proteins as their direct targets. In this review, we summarize the current knowledge on kinases and phosphatases acting on the core autophagy machinery and discuss the relevance of phosphoregulation for the overall process of autophagy.

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ER-phagy: mechanisms, regulation, and diseases connected to the lysosomal clearance of the endoplasmic reticulum

TL;DR: ER-phagy is dysfunctional in specific human diseases and its regulators are subverted by pathogens, highlighting its crucial role for cell and organism life.
Journal ArticleDOI

Molecular regulation of autophagosome formation

TL;DR: The current knowledge about the molecular regulation of autophagosome formation is described, with a particular focus on budding yeast and mammalian cells.
Journal ArticleDOI

Molecular regulation of autophagosome formation

TL;DR: A review of the current knowledge about the molecular regulation of autophagosome formation, with a particular focus on budding yeast and mammalian cells, can be found in this article , where the authors describe the current state-of-the-art in autophagy.
Journal ArticleDOI

The AMPK pathway in fatty liver disease

TL;DR: A detailed description of each signaling axis of the AMPK pathway, as well as a discussion of its mechanism of action and therapeutic significance, is performed in this review.
Journal ArticleDOI

Post-Translational Modifications of ATG4B in the Regulation of Autophagy

Na Yeon Park, +2 more
- 01 Apr 2022 - 
TL;DR: Recent advances in understanding of the effect of post-translational modification on the regulation, activity, and function of ATG4, the main protease that controls autophagy are reviewed.
References
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Journal ArticleDOI

Does Huntingtin play a role in selective macroautophagy

TL;DR: The accumulation of protein aggregates in neurons appears to be a basic feature of neurodegenerative disease and the cellular mechanisms which modulates the rate at which fragments of Htt containing polyglutamine accumulate in neurons is a central issue in the development of approaches to modulate the rate and extent of neuronal loss in this disease.
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Phosphatidylinositol 4-kinases are required for autophagic membrane trafficking.

TL;DR: It is shown that PtdIns4P, similar to PTDIns3P, regulates autophagy and affects Atg9 trafficking and indicates that phosphoinositide kinases have multiple roles in the regulation of autophagic pathways.
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Protein phosphatase 2A on track for nutrient-induced signalling in yeast.

TL;DR: It will be shown how these new elements could lead to understand the role and regulation of PP2A in nutrient‐induced signalling in baker’s yeast.
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Phosphorylation of Atg9 regulates movement to the phagophore assembly site and the rate of autophagosome formation

TL;DR: Electron microscopy analysis suggests that the different levels of autophagy activity reflect differences in autophagosome formation, correlating with the delivery of Atg9 to the PAS, and stable isotope labeling by amino acids in cell culture identified phosphorylation sites on this protein.
Journal ArticleDOI

Activation of Atg1 kinase in autophagy by regulated phosphorylation

TL;DR: The data suggest that phosphorylation of Atg1 on multiple sites provides critical mechanisms to regulate AtG1 function in autophagy and the Cvt pathway.
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