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Phosphoregulation of the autophagy machinery by kinases and phosphatases.

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TLDR
In this paper, the authors summarize the current knowledge on kinases and phosphatases acting on the core autophagy machinery and discuss the relevance of phosphoregulation for the overall process of autophagocytosis.
Abstract
Eukaryotic cells use post-translational modifications to diversify and dynamically coordinate the function and properties of protein networks within various cellular processes. For example, the process of autophagy strongly depends on the balanced action of kinases and phosphatases. Highly conserved from the budding yeast Saccharomyces cerevisiae to humans, autophagy is a tightly regulated self-degradation process that is crucial for survival, stress adaptation, maintenance of cellular and organismal homeostasis, and cell differentiation and development. Many studies have emphasized the importance of kinases and phosphatases in the regulation of autophagy and identified many of the core autophagy proteins as their direct targets. In this review, we summarize the current knowledge on kinases and phosphatases acting on the core autophagy machinery and discuss the relevance of phosphoregulation for the overall process of autophagy.

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ER-phagy: mechanisms, regulation, and diseases connected to the lysosomal clearance of the endoplasmic reticulum

TL;DR: ER-phagy is dysfunctional in specific human diseases and its regulators are subverted by pathogens, highlighting its crucial role for cell and organism life.
Journal ArticleDOI

Molecular regulation of autophagosome formation

TL;DR: The current knowledge about the molecular regulation of autophagosome formation is described, with a particular focus on budding yeast and mammalian cells.
Journal ArticleDOI

Molecular regulation of autophagosome formation

TL;DR: A review of the current knowledge about the molecular regulation of autophagosome formation, with a particular focus on budding yeast and mammalian cells, can be found in this article , where the authors describe the current state-of-the-art in autophagy.
Journal ArticleDOI

The AMPK pathway in fatty liver disease

TL;DR: A detailed description of each signaling axis of the AMPK pathway, as well as a discussion of its mechanism of action and therapeutic significance, is performed in this review.
Journal ArticleDOI

Post-Translational Modifications of ATG4B in the Regulation of Autophagy

Na Yeon Park, +2 more
- 01 Apr 2022 - 
TL;DR: Recent advances in understanding of the effect of post-translational modification on the regulation, activity, and function of ATG4, the main protease that controls autophagy are reviewed.
References
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Journal ArticleDOI

PP2C Phosphatases Ptc2 and Ptc3 Are Required for DNA Checkpoint Inactivation after a Double-Strand Break

TL;DR: In this paper, the PP2C-like phosphatases Ptc2 and Ptc3 are shown to specifically bind to the Rad53 FHA1 domain and inactivate Rad53-dependent pathways during adaptation and recovery by dephosphorylating Rad53.
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A role for Atg8–PE deconjugation in autophagosome biogenesis

TL;DR: It is demonstrated that Atg8 deconjugation is an important step required to facilitate multiple events during macroautophagy, including the assembly of Atg9-containing tubulovesicular clusters into phagophores/autophagosomes, and the disassembly of PAS-associated Atg components.
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Regulation of autophagy by coordinated action of mTORC1 and protein phosphatase 2A

TL;DR: Takeaway is that concurrent mTORC1 inactivation and PP2A–B55α stimulation fuel ULK1-dependent autophagy, a cellular catabolic process critical for cell viability and homoeostasis.
Journal ArticleDOI

Autophagosome Maturation and Fusion.

TL;DR: This review will focus on recent insights into the molecular events following the sealing/completion of an autophagosome, which lead to its maturation and subsequent fusion with endosomes/lysosomes.
Journal ArticleDOI

Cul3-KLHL20 Ubiquitin Ligase Governs the Turnover of ULK1 and VPS34 Complexes to Control Autophagy Termination

TL;DR: It is shown that ULK1, a serine/threonine kinase critical for autophagy initiation, is a substrate of the Cul3-KLHL20 ubiquitin ligase, and KLHL20 governs the degradation of ATG13, VPS34, Beclin-1, and ATG14 in prolonged starvation through a direct or indirect mechanism.
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