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Journal ArticleDOI

Population genetics of the Schistosoma snail host Bulinus truncatus in Egypt.

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TLDR
Signs of gene flow and cross-fertilization are found, even between snails from the Nile Delta and Upper Egypt, indicating that B. truncatus can travel across large distances in Egypt, which could have serious consequences for disease epidemiology.
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This article is published in Acta Tropica.The article was published on 2017-08-01. It has received 13 citations till now. The article focuses on the topics: Bulinus truncatus & Freshwater snail.

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Habitat suitability modelling for predicting potential habitats of freshwater snail intermediate hosts in Omo-Gibe river basin, Southwest Ethiopia

TL;DR: Preventing human disturbance in water bodies may enhance aquatic biodiversity, thereby increasing the abundance of snail predators and competitors, according to the habitat gradient studied.
Journal ArticleDOI

DNA and eDNA-based tracking of the North African sharptooth catfish Clarias gariepinus.

TL;DR: A study of the genetic diversity of the African sharptooth catfish along the River Nile in Egypt through sequencing of the mitochondrial cytochrome oxidase subunit I (COI) and a qPCR assay developed to assess the species abundance through environmental water DNA samples (eDNA).
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Molecular identification of Bulinus spp. intermediate host snails of Schistosoma spp. in crater lakes of western Uganda with implications for the transmission of the Schistosoma haematobium group parasites.

TL;DR: This first detailed malacological study of the crater lakes systems in western Uganda revealed presence of Bulinus species that are either not known or not regionally known to be hosts for S. haematobium, the causing agent of human urogenital schistosomiasis.
Journal ArticleDOI

Phylogeography of Bulinus truncatus (Audouin, 1827) (Gastropoda: Planorbidae) in Selected African Countries.

TL;DR: The location of populations from Egypt and Sudan on the B. truncatus clade agrees with the location of both countries geographically and the clustering of the Zimbabwe sequences on different locations on the clade can be attributed to individuals with different genotypes within the population.
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Molecular diversity of Bulinus species in Madziwa area, Shamva district in Zimbabwe: implications for urogenital schistosomiasis transmission

TL;DR: Low prevalence levels of infection observed in the snails may reflect the low transmission level of urogenital schistosomiasis in the area, supporting the mapping of the transmission or risk of transmission ofUrogenitalSchistosoma haematobium, particularly in Zimbabwe.
References
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Basic Local Alignment Search Tool

TL;DR: A new approach to rapid sequence comparison, basic local alignment search tool (BLAST), directly approximates alignments that optimize a measure of local similarity, the maximal segment pair (MSP) score.
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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

TL;DR: ClUSTAL X is a new windows interface for the widely-used progressive multiple sequence alignment program CLUSTAL W, providing an integrated system for performing multiple sequence and profile alignments and analysing the results.
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Inference of population structure using multilocus genotype data

TL;DR: Pritch et al. as discussed by the authors proposed a model-based clustering method for using multilocus genotype data to infer population structure and assign individuals to populations, which can be applied to most of the commonly used genetic markers, provided that they are not closely linked.
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Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

TL;DR: It is found that in most cases the estimated ‘log probability of data’ does not provide a correct estimation of the number of clusters, K, and using an ad hoc statistic ΔK based on the rate of change in the log probability between successive K values, structure accurately detects the uppermost hierarchical level of structure for the scenarios the authors tested.
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Estimating F-statistics for the analysis of population structure.

TL;DR: The purpose of this discussion is to offer some unity to various estimation formulae and to point out that correlations of genes in structured populations, with which F-statistics are concerned, are expressed very conveniently with a set of parameters treated by Cockerham (1 969, 1973).
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