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The K = 2 conundrum.

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TLDR
This review suggests that many studies may have been over‐ or underestimating population genetic structure; both scenarios have serious consequences, particularly with respect to conservation and management.
Abstract
Assessments of population genetic structure have become an increasing focus as they can provide valuable insight into patterns of migration and gene flow structure, the most highly cited of several clustering-based methods, was developed to provide robust estimates without the need for populations to be determined a priori structure introduces the problem of selecting the optimal number of clusters, and as a result, the ΔK method was proposed to assist in the identification of the "true" number of clusters In our review of 1,264 studies using structure to explore population subdivision, studies that used ΔK were more likely to identify K = 2 (54%, 443/822) than studies that did not use ΔK (21%, 82/386) A troubling finding was that very few studies performed the hierarchical analysis recommended by the authors of both ΔK and structure to fully explore population subdivision Furthermore, extensions of earlier simulations indicate that, with a representative number of markers, ΔK frequently identifies K = 2 as the top level of hierarchical structure, even when more subpopulations are present This review suggests that many studies may have been over- or underestimating population genetic structure; both scenarios have serious consequences, particularly with respect to conservation and management We recommend publication standards for population structure results so that readers can assess the implications of the results given their own understanding of the species biology

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Citations
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Evaluation of model fit of inferred admixture proportions.

TL;DR: This work proposes a method to evaluate the fit of admixture models based on estimating the correlation of the residual difference between the true genotypes and the genotypes predicted by the model, and shows how the method is able to detect a bad fit of inferred admixture proportions due to using an insufficient number of clusters K.
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Population Structure of the World Vegetable Center Mungbean Mini Core Collection and Genome-Wide Association Mapping of Loci Associated with Variation of Seed Coat Luster

TL;DR: The population structure of the World Vegetable Center’s mungbean mini core collection is analyzed and a genome-wide association study (GWAS) is performed to identify loci associated with seed coat luster (SCL) utilizing SNP markers.
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Genetic diversity in the endangered terrestrial orchid Cypripedium japonicum in East Asia: Insights into population history and implications for conservation.

TL;DR: The results indicate that the mountain areas in central and western China were likely refugia at the Last Glacial Maximum and C. japonicum in China maintains the highest genetic variation among the three countries.
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Is the central-marginal hypothesis a general rule? Evidence from three distributions of an expanding mangrove species, Avicennia germinans (L.) L.

TL;DR: It is argued that mangroves provide a model system to test CMH that alleviates common confounding factors and may help clarify this lack of consensus, and previous accounts that CMH may not be a general rule across species and that reduced neutral genetic diversity at range margins mayNot be a constraint to shifts in functional trait variation along climatic gradients are supported.
References
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Journal ArticleDOI

Inference of population structure using multilocus genotype data

TL;DR: Pritch et al. as discussed by the authors proposed a model-based clustering method for using multilocus genotype data to infer population structure and assign individuals to populations, which can be applied to most of the commonly used genetic markers, provided that they are not closely linked.
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Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

TL;DR: It is found that in most cases the estimated ‘log probability of data’ does not provide a correct estimation of the number of clusters, K, and using an ad hoc statistic ΔK based on the rate of change in the log probability between successive K values, structure accurately detects the uppermost hierarchical level of structure for the scenarios the authors tested.
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Estimating F-statistics for the analysis of population structure.

TL;DR: The purpose of this discussion is to offer some unity to various estimation formulae and to point out that correlations of genes in structured populations, with which F-statistics are concerned, are expressed very conveniently with a set of parameters treated by Cockerham (1 969, 1973).
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STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

TL;DR: STRUCTURE HARVESTER is presented, a web-based program for collating results generated by the program STRUCTURE, which provides a fast way to assess and visualize likelihood values across multiple values of K and hundreds of iterations for easier detection of the number of genetic groups that best fit the data.
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Trending Questions (1)
What are the detriments of k 10 2?

The provided paper does not mention any detriments of k = 2. The paper discusses the use of the ΔK method to identify the optimal number of clusters in population genetic structure studies.