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Adriana Muñoz

Researcher at University of Ottawa

Publications -  15
Citations -  711

Adriana Muñoz is an academic researcher from University of Ottawa. The author has contributed to research in topics: Genome & Contig. The author has an hindex of 7, co-authored 15 publications receiving 580 citations. Previous affiliations of Adriana Muñoz include University of Maryland, College Park & University of Alberta.

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The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

Lorenzo Carretero-Paulet, +69 more
- 05 Sep 2014 - 
TL;DR: The Coffea canephora (coffee) genome was sequenced and identified a conserved gene order, and comparative analyses of caffeine NMTs demonstrate that these genes expanded through sequential tandem duplications independently of genes from cacao and tea, suggesting that caffeine in eudicots is of polyphyletic origin.
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Scaffold filling, contig fusion and comparative gene order inference.

TL;DR: The algorithm solves the comparison of genomes with 18,300 genes, including 4500 missing from one genome, in less than a minute on a MacBook, putting virtually all genomes within range of the method.
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Tigukat: a uniform behavioral objectbase management system

TL;DR: The TIGUKAT objectbase management system, which is under development at the Laboratory for Database Systems Research at the University of Alberta, has a novel object model, whose identifying characteristics include a purely behavioral semantics and a uniform approach to objects.
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Rates of contributory de novo mutation in high and low-risk autism families.

TL;DR: In this paper, the authors report on findings from whole genome sequence (WGS) of both simplex and multiplex families from the Simons Simplex Collection (SSC) and the Autism Genetic Resource Exchange (AGRE) and find that the contribution of de novo mutation in multiplex is significantly smaller than the contribution in simplex.
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Rearrangement Phylogeny of Genomes in Contig Form

TL;DR: This work proposes to use the contigs directly in the rearrangement algorithms as if they were chromosomes, while making a number of corrections, e.g., the authors correct for the number of extra fusion/fission operations required to make contigs comparable to full assemblies.