M
Maria Bernard
Researcher at Institut national de la recherche agronomique
Publications - 21
Citations - 4481
Maria Bernard is an academic researcher from Institut national de la recherche agronomique. The author has contributed to research in topics: Genome & Rainbow trout. The author has an hindex of 14, co-authored 19 publications receiving 3633 citations. Previous affiliations of Maria Bernard include École Normale Supérieure & French Institute of Health and Medical Research.
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Journal ArticleDOI
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome
Boulos Chalhoub,Shengyi Liu,Isobel A. P. Parkin,Haibao Tang,Haibao Tang,Xiyin Wang,Julien Chiquet,Harry Belcram,Chaobo Tong,Birgit Samans,Margot Correa,Corinne Da Silva,Jérémy Just,Cyril Falentin,Chu Shin Koh,Isabelle Le Clainche,Maria Bernard,Pascal Bento,Benjamin Noel,Karine Labadie,Adriana Alberti,Mathieu Charles,Dominique Arnaud,Hui Guo,Christian Daviaud,Salman Alamery,Kamel Jabbari,Kamel Jabbari,Meixia Zhao,Patrick P. Edger,Houda Chelaifa,David C. Tack,Gilles Lassalle,Imen Mestiri,Nicolas Schnel,Marie-Christine Le Paslier,Guangyi Fan,Victor Renault,Philippe E. Bayer,Agnieszka A. Golicz,Sahana Manoli,Tae-Ho Lee,Vinh Ha Dinh Thi,Smahane Chalabi,Qiong Hu,Chuchuan Fan,Reece Tollenaere,Yunhai Lu,Christophe Battail,Jinxiong Shen,Christine Sidebottom,Xinfa Wang,Aurélie Canaguier,Aurélie Chauveau,Aurélie Bérard,G. Deniot,Mei Guan,Zhongsong Liu,Fengming Sun,Yong Pyo Lim,Eric Lyons,Christopher D. Town,Ian Bancroft,Xiaowu Wang,Jinling Meng,Jianxin Ma,J. Chris Pires,Graham J.W. King,Dominique Brunel,Régine Delourme,Michel Renard,Jean-Marc Aury,Keith L. Adams,Jacqueline Batley,Jacqueline Batley,Rod J. Snowdon,Jörg Tost,David Edwards,David Edwards,Yongming Zhou,Wei Hua,Andrew G. Sharpe,Andrew H. Paterson,Chunyun Guan,Patrick Wincker,Patrick Wincker,Patrick Wincker +86 more
TL;DR: The polyploid genome of Brassica napus, which originated from a recent combination of two distinct genomes approximately 7500 years ago and gave rise to the crops of rape oilseed, is sequenced.
Journal ArticleDOI
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
Angélique D'Hont,Jean-Marc Aury,Franc-Christophe Baurens,Françoise Carreel,Olivier Garsmeur,Benjamin Noel,Stéphanie Bocs,Gaëtan Droc,Mathieu Rouard,Corinne Da Silva,Kamel Jabbari,Kamel Jabbari,Kamel Jabbari,Céline Cardi,Julie Poulain,Marlã̈ne Souquet,Karine Labadie,Cyril Jourda,Juliette Lengellé,Marguerite Rodier-Goud,Adriana Alberti,Maria Bernard,Margot Correa,Saravanaraj Ayyampalayam,Michael R. McKain,Jim Leebens-Mack,Diane Burgess,Michael Freeling,Didier Mbéguié-A-Mbéguié,Matthieu Chabannes,Thomas Wicker,Olivier Panaud,Jose Barbosa,E. Hribova,Pat Heslop-Harrison,Rémy Habas,Ronan Rivallan,Philippe Francois,Claire Poiron,Andrzej Kilian,Dheema Burthia,Christophe Jenny,Frédéric Bakry,Spencer Brown,Valentin Guignon,Valentin Guignon,Gert H. J. Kema,Miguel A. Dita,Cees Waalwijk,Steeve Joseph,Anne Dievart,Olivier Jaillon,Olivier Jaillon,Olivier Jaillon,Julie Leclercq,Xavier Argout,Eric Lyons,Ana Maria Rocha de Almeida,Mouna Jeridi,Jaroslav Dolezel,Nicolas Roux,Ange-Marie Risterucci,Jean Weissenbach,Jean Weissenbach,Jean Weissenbach,Manuel Ruiz,Jean-Christophe Glaszmann,Francis Quetier,Nabila Yahiaoui,Patrick Wincker,Patrick Wincker,Patrick Wincker +71 more
TL;DR: This first monocotyledon high-continuity whole-genome sequence reported outside Poales represents an essential bridge for comparative genome analysis in plants and clarifies commelinid-monocotYledon phylogenetic relationships, reveals Poaceae-specific features and has led to the discovery of conserved non-coding sequences predating monocotinoid–eudicotylingon divergence.
Journal ArticleDOI
The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates
Camille Berthelot,Frédéric Brunet,Domitille Chalopin,Amélie Juanchich,Maria Bernard,Benjamin Noel,Pascal Bento,Corinne Da Silva,Karine Labadie,Adriana Alberti,Jean-Marc Aury,Alexandra Louis,Patrice Dehais,Philippe Bardou,Jérôme Montfort,Christophe Klopp,Cédric Cabau,Christine Gaspin,Gary H. Thorgaard,Mekki Boussaha,Edwige Quillet,René Guyomard,Delphine Galiana,Julien Bobe,Jean-Nicolas Volff,Carine Genet,Patrick Wincker,Olivier Jaillon,Hugues Roest Crollius,Yann Guiguen +29 more
TL;DR: It is shown that after 100 million years of evolution the two ancestral subgenomes have remained extremely collinear, despite the loss of half of the duplicated protein-coding genes, mostly through pseudogenization.
Journal ArticleDOI
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis
Lorenzo Carretero-Paulet,Alexis Dereeper,Gaëtan Droc,Romain Guyot,Marco Pietrella,Chunfang Zheng,Adriana Alberti,François Anthony,G. Aprea,Jean-Marc Aury,Pascal Bento,Maria Bernard,Stéphanie Bocs,Claudine Campa,Alberto Cenci,Alberto Cenci,Marie Christine Combes,Dominique Crouzillat,Corinne Da Silva,Loretta Daddiego,Fabien De Bellis,Stéphane Dussert,Olivier Garsmeur,Thomas Gayraud,Valentin Guignon,Katharina Jahn,Katharina Jahn,Véronique Jamilloux,Thierry Joët,Karine Labadie,Tianying Lan,Tianying Lan,Julie Leclercq,Maud Lepelley,Thierry Leroy,Leiting Li,Pablo Librado,Loredana Lopez,Adriana Muñoz,Adriana Muñoz,Benjamin Noel,Alberto Pallavicini,Gaetano Perrotta,Valérie Poncet,David Pot,Priyono,Michel Rigoreau,Mathieu Rouard,Julio Rozas,Christine Tranchant-Dubreuil,Robert VanBuren,Qiong Zhang,Alan Carvalho Andrade,Xavier Argout,Benoît Bertrand,Alexandre de Kochko,Giorgio Graziosi,Giorgio Graziosi,Robert J Henry,Jayarama,Ray Ming,Chifumi Nagai,Steve Rounsley,David Sankoff,Giovanni Giuliano,Victor A. Albert,Patrick Wincker,Patrick Wincker,Patrick Wincker,Philippe Lashermes +69 more
TL;DR: The Coffea canephora (coffee) genome was sequenced and identified a conserved gene order, and comparative analyses of caffeine NMTs demonstrate that these genes expanded through sequential tandem duplications independently of genes from cacao and tea, suggesting that caffeine in eudicots is of polyphyletic origin.
Journal ArticleDOI
Eoulsan: a cloud computing-based framework facilitating high throughput sequencing analyses
TL;DR: Eoulsan allows users to easily set up a cloud computing cluster and automate the analysis of several samples at once using various software solutions available, based on the Hadoop implementation of the MapReduce algorithm dedicated to high-throughput sequencing data analysis.