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Anurag Sethi
Researcher at Yale University
Publications - 41
Citations - 3490
Anurag Sethi is an academic researcher from Yale University. The author has contributed to research in topics: Biology & Cellulase. The author has an hindex of 23, co-authored 36 publications receiving 2876 citations. Previous affiliations of Anurag Sethi include University of Illinois at Urbana–Champaign & Los Alamos National Laboratory.
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Journal ArticleDOI
Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.
W. Marston Linehan,Paul T. Spellman,Christopher J. Ricketts,Chad J. Creighton,Suzanne S. Fei,Caleb F. Davis,David A. Wheeler,Bradley A. Murray,Laura S. Schmidt,Cathy D. Vocke,Myron Peto,Abu Amar M. Al Mamun,Eve Shinbrot,Anurag Sethi,Samira A. Brooks,W. Kimryn Rathmell,Angela N. Brooks,Katherine A. Hoadley,A. Gordon Robertson,Denise Brooks,Reanne Bowlby,Sara Sadeghi,Hui Shen,Daniel J. Weisenberger,Moiz S. Bootwalla,Stephen B. Baylin,Peter W. Laird,Andrew D. Cherniack,Gordon Saksena,Scott M. Haake,Jun Li,Han Liang,Yiling Lu,Gordon B. Mills,Rehan Akbani,Mark D.M. Leiserson,Benjamin J. Raphael,Pavana Anur,Donald P. Bottaro,Laurence Albiges,Nandita Barnabas,Toni K. Choueiri,Bogdan Czerniak,Andrew K. Godwin,A. Ari Hakimi,Thai H. Ho,James J. Hsieh,Michael M. Ittmann,William Y. Kim,Bhavani Krishnan,Maria Merino,Kenna R. Mills Shaw,Victor E. Reuter,Ed Reznik,Carl Simon Shelley,Brian Shuch,Sabina Signoretti,Ramaprasad Srinivasan,Pheroze Tamboli,George Thomas,Satish K. Tickoo,Kenneth Burnett,Daniel Crain,Johanna Gardner,Kevin Lau,David Mallery,Scott Morris,Joseph Paulauskis,Robert Penny,Candace Shelton,W. Troy Shelton,Mark E. Sherman,Eric M. Thompson,Peggy Yena,Melissa T. Avedon,Jay Bowen,Julie M. Gastier-Foster,Mark Gerken,Kristen M. Leraas,Tara M. Lichtenberg,Nilsa C. Ramirez,Tracie Santos,Lisa Wise,Erik Zmuda,John A. Demchok,Ina Felau,Carolyn M. Hutter,Margi Sheth,Heidi J. Sofia,Roy Tarnuzzer,Zhining Wang,Liming Yang,Jean C. Zenklusen,Jiashan Zhang,Brenda Ayala,Julien Baboud,Sudha Chudamani,Jia Liu,Laxmi Lolla,Rashi Naresh,Todd Pihl,Qiang Sun,Yunhu Wan,Ye Wu,Adrian Ally,Miruna Balasundaram,Saianand Balu,Rameen Beroukhim,Tom Bodenheimer,Christian J. Buhay,Yaron S.N. Butterfield,Rebecca Carlsen,Scott L. Carter,Hsu Chao,Eric Chuah,Amanda Clarke,Kyle R. Covington,Mahmoud Dahdouli,Ninad Dewal,Noreen Dhalla,Harsha Doddapaneni,Jennifer Drummond,Stacey Gabriel,Richard A. Gibbs,Ranabir Guin,Walker Hale,Alicia Hawes,D. Neil Hayes,Robert A. Holt,Alan P. Hoyle,Stuart R. Jefferys,Steven J.M. Jones,Corbin D. Jones,Divya Kalra,Christie Kovar,Lora Lewis,Jie Li,Yussanne Ma,Marco A. Marra,Michael Mayo,Shaowu Meng,Matthew Meyerson,Piotr A. Mieczkowski,Richard A. Moore,Donna Morton,Lisle E. Mose,Andrew J. Mungall,Donna M. Muzny,Joel S. Parker,Charles M. Perou,Jeffrey Roach,Jacqueline E. Schein,Steven E. Schumacher,Yan Shi,Janae V. Simons,Payal Sipahimalani,Tara Skelly,Matthew G. Soloway,Carrie Sougnez,Angela Tam,Donghui Tan,Nina Thiessen,Umadevi Veluvolu,Min Wang,Matthew D. Wilkerson,Tina Wong,Junyuan Wu,Liu Xi,Jane Zhou,Jason Bedford,Fengju Chen,Yao Fu,Mark Gerstein,David Haussler,Katayoon Kasaian,Phillip H. Lai,Shiyun Ling,Amie Radenbaugh,David Van Den Berg,John N. Weinstein,Jingchun Zhu,Monique Albert,Iakovina Alexopoulou,Jeremiah J. Andersen,J. Todd Auman,John Bartlett,Sheldon I. Bastacky,Julie Bergsten,Michael L. Blute,Lori Boice,Roni J. Bollag,Jeff Boyd,Erik P. Castle,Ying-Bei Chen,John C. Cheville,Erin Curley,Benjamin Davies,April DeVolk,Rajiv Dhir,Laura Dike,John Eckman,Jay Engel,Jodi Harr,Ronald L. Hrebinko,Mei Huang,Lori Huelsenbeck-Dill,Mary Iacocca,Bruce L. Jacobs,Michael Lobis,Jodi K. Maranchie,Scott McMeekin,Jerome Myers,Joel Nelson,Jeremy Parfitt,Anil V. Parwani,Nicholas J. Petrelli,Brenda Rabeno,Somak Roy,Andrew Salner,Joel Slaton,Melissa L. Stanton,R. Houston Thompson,Leigh B. Thorne,Kelinda Tucker,Paul M. Weinberger,Cynthia Winemiller,Leigh Anne Zach,Rosemary E. Zuna +227 more
TL;DR: Type 1 and type 2 papillary renal-cell carcinomas were shown to be different types of renal cancer characterized by specific genetic alterations, with type 2 further classified into three individual subgroups on the basis of molecular differences associated with patient survival.
Journal ArticleDOI
Dynamical networks in tRNA:protein complexes
TL;DR: A dynamic contact map defines the edges connecting nodes (amino acids and nucleotides) in the physical network whose overall topology is presented as a network of communities, local substructures that are highly intraconnected, but loosely interconnected.
Journal ArticleDOI
Comparative analysis of the transcriptome across distant species
Mark Gerstein,Joel Rozowsky,Koon-Kiu Yan,Daifeng Wang,Chao Cheng,James B. Brown,James B. Brown,Carrie A. Davis,LaDeana W. Hillier,Cristina Sisu,Jingyi Jessica Li,Jingyi Jessica Li,Baikang Pei,Arif Harmanci,Michael O. Duff,Sarah Djebali,Roger P. Alexander,Burak H. Alver,Raymond K. Auerbach,Kimberly Bell,Peter J. Bickel,Max E. Boeck,Nathan Boley,Nathan Boley,Benjamin W. Booth,Lucy Cherbas,Peter Cherbas,Chao Di,Alexander Dobin,Jorg Drenkow,Brent Ewing,Gang Fang,Megan Fastuca,Elise A. Feingold,Adam Frankish,Guanjun Gao,Peter J. Good,Roderic Guigó,Ann S. Hammonds,Jen Harrow,Roger A. Hoskins,Cédric Howald,Cédric Howald,Long Hu,Haiyan Huang,Tim Hubbard,Tim Hubbard,Chau Huynh,Sonali Jha,Dionna M. Kasper,Masaomi Kato,Thomas C. Kaufman,Robert R. Kitchen,Erik Ladewig,Julien Lagarde,Eric C. Lai,Jing Leng,Zhi Lu,Michael J. MacCoss,Gemma E. May,Gemma E. May,Rebecca McWhirter,Gennifer E. Merrihew,David M. Miller,Ali Mortazavi,Rabi Murad,Brian Oliver,Sara Olson,Peter J. Park,Michael J. Pazin,Norbert Perrimon,Norbert Perrimon,Dmitri D. Pervouchine,Valerie Reinke,Alexandre Reymond,Garrett Robinson,Anastasia Samsonova,Anastasia Samsonova,Gary Saunders,Gary Saunders,Felix Schlesinger,Anurag Sethi,Frank J. Slack,William C. Spencer,Marcus H. Stoiber,Marcus H. Stoiber,Pnina Strasbourger,Andrea Tanzer,Andrea Tanzer,Owen Thompson,Kenneth H. Wan,Guilin Wang,Huaien Wang,Kathie L. Watkins,Jiayu Wen,Kejia Wen,Chenghai Xue,Li Yang,Li Yang,Kevin Y. Yip,Chris Zaleski,Yan Zhang,Henry Zheng,Steven E. Brenner,Brenton R. Graveley,Susan E. Celniker,Thomas R. Gingeras,Robert H. Waterston +107 more
TL;DR: It is found in all three organisms that the gene-expression levels, both coding and non-coding, can be quantitatively predicted from chromatin features at the promoter using a ‘universal model’ based on a single set of organism-independent parameters.
Journal ArticleDOI
Increased enzyme binding to substrate is not necessary for more efficient cellulose hydrolysis
Dahai Gao,Shishir P. S. Chundawat,Anurag Sethi,Venkatesh Balan,Venkatesh Balan,Sandrasegaram Gnanakaran,Bruce E. Dale,Bruce E. Dale +7 more
TL;DR: A comprehensive kinetic model for processive cellulases acting on insoluble substrates is developed and predicts that a reduction in the effective binding affinity to the substrate coupled with an increase in the decrystallization procession rate of individual cellulose chains from the substrate surface into the enzyme active site can reproduce the anomalous experimental findings.
Journal ArticleDOI
Molecular signatures of ribosomal evolution
TL;DR: It is proposed that the ribosomal signatures are remnants of an evolutionary-phase transition that occurred as the cell lineages began to coalesce and so should be reflected in corresponding signatures throughout the fabric of the cell and its genome.