J
Jonas Niemann
Researcher at University of Copenhagen
Publications - 14
Citations - 325
Jonas Niemann is an academic researcher from University of Copenhagen. The author has contributed to research in topics: Population & Outbreak. The author has an hindex of 7, co-authored 13 publications receiving 197 citations. Previous affiliations of Jonas Niemann include American Museum of Natural History & University of York.
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Journal ArticleDOI
Interspecific Gene Flow Shaped the Evolution of the Genus Canis.
Shyam Gopalakrishnan,Mikkel-Holger S. Sinding,Jazmín Ramos-Madrigal,Jonas Niemann,José Alfredo Samaniego Castruita,Filipe G. Vieira,Christian Carøe,Marc de Manuel Montero,Lukas F. K. Kuderna,Aitor Serres,Víctor M. González-Basallote,Yan-Hu Liu,Guo-Dong Wang,Tomas Marques-Bonet,Siavash Mirarab,Carlos Fernandes,Philippe Gaubert,Klaus-Peter Koepfli,Klaus-Peter Koepfli,Jane Budd,Eli Knispel Rueness,Claudio Sillero,Claudio Sillero,Mads Peter Heide-Jørgensen,Mads Peter Heide-Jørgensen,Bent O. Petersen,Thomas Sicheritz-Pontén,Lutz Bachmann,Øystein Wiig,Anders J. Hansen,Anders J. Hansen,M. Thomas P. Gilbert,M. Thomas P. Gilbert +32 more
TL;DR: A dataset of 48 resequenced genomes spanning all members of the genus Canis except the black-backed and side-striped jackals, encompassing the global diversity of seven extant canid lineages, finds gene flow between the ancestors of the dhole and African hunting dog and admixture between the gray wolf, coyote, golden jackal, and African golden wolf.
Journal ArticleDOI
Genomes of Pleistocene Siberian Wolves Uncover Multiple Extinct Wolf Lineages.
Jazmín Ramos-Madrigal,Mikkel-Holger S. Sinding,Christian Carøe,Sarah S.T. Mak,Jonas Niemann,José Alfredo Samaniego Castruita,Sergey Fedorov,Alexander V. Kandyba,Mietje Germonpré,Hervé Bocherens,Tatiana R. Feuerborn,Tatiana R. Feuerborn,Vladimir V. Pitulko,Elena Y. Pavlova,Pavel A. Nikolskiy,Aleksei Kasparov,Varvara V. Ivanova,Greger Larson,Laurent A. F. Frantz,Laurent A. F. Frantz,Eske Willerslev,Morten Meldgaard,Morten Meldgaard,Bent O. Petersen,Thomas Sicheritz-Pontén,Lutz Bachmann,Øystein Wiig,Anders J. Hansen,Anders J. Hansen,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Shyam Gopalakrishnan,Shyam Gopalakrishnan +32 more
TL;DR: The results show that, though the four specimens represent extinct wolf lineages, they do not form a monophyletic group, and each Pleistocene Siberian canid branched off the lineage that gave rise to present-day wolves and dogs.
Journal ArticleDOI
A 5700 year-old human genome and oral microbiome from chewed birch pitch.
Theis Zetner Trolle Jensen,Theis Zetner Trolle Jensen,Jonas Niemann,Jonas Niemann,Katrine Højholt Iversen,Katrine Højholt Iversen,Anna K. Fotakis,Shyam Gopalakrishnan,Åshild J. Vågene,Mikkel Winther Pedersen,Mikkel-Holger S. Sinding,Martin R. Ellegaard,Morten E. Allentoft,Liam T. Lanigan,Alberto J. Taurozzi,Sofie Holtsmark Nielsen,Michael W. Dee,Martin Mortensen,Mads C. Christensen,Søren A. Sørensen,Matthew J. Collins,Matthew J. Collins,M. Thomas P. Gilbert,M. Thomas P. Gilbert,Martin Sikora,Simon Rasmussen,Hannes Schroeder +26 more
TL;DR: A 5,700 year-old piece of chewed birch pitch from Denmark is reported from which a complete ancient human genome and oral microbiome DNA is sequenced and it is found that the individual who chewed the pitch was female and that she was genetically more closely related to western hunter-gatherers from mainland Europe thanhunter-gathererrs from central Scandinavia.
Journal ArticleDOI
Arctic-adapted dogs emerged at the Pleistocene-Holocene transition
Mikkel-Holger S. Sinding,Shyam Gopalakrishnan,Jazmín Ramos-Madrigal,Marc de Manuel,Vladimir V. Pitulko,Lukas F. K. Kuderna,Tatiana R. Feuerborn,Laurent A. F. Frantz,Laurent A. F. Frantz,Filipe G. Vieira,Jonas Niemann,Jonas Niemann,José Alfredo Samaniego Castruita,Christian Carøe,Emilie Andersen-Ranberg,Emilie Andersen-Ranberg,Peter Jordan,Elena Y. Pavlova,Pavel A. Nikolskiy,Aleksei Kasparov,Varvara V. Ivanova,Eske Willerslev,Pontus Skoglund,Pontus Skoglund,Merete Fredholm,Sanne Eline Wennerberg,Mads Peter Heide-Jørgensen,Rune Dietz,Christian Sonne,Christian Sonne,Christian Sonne,Morten Meldgaard,Morten Meldgaard,Love Dalén,Greger Larson,Bent O. Petersen,Thomas Sicheritz-Pontén,Lutz Bachmann,Øystein Wiig,Tomas Marques-Bonet,Anders J. Hansen,Anders J. Hansen,M. Thomas P. Gilbert,M. Thomas P. Gilbert +43 more
TL;DR: This analysis indicates that sled dogs represent an ancient lineage going back at least 9500 years and that wolves bred with the ancestors of sled dogs and precontact American dogs, however, gene flow between sled Dogs and wolves likely stopped before ∼9500 years ago.
Journal ArticleDOI
False‐negative detections from environmental DNA collected in the presence of large numbers of killer whales (Orcinus orca)
Róisín Pinfield,Eileen Dillane,Anne Kathrine W. Runge,Anne Kathrine W. Runge,Alice R. Evans,Luca Mirimin,Jonas Niemann,Jonas Niemann,Thomas E. Reed,David G. Reid,Emer Rogan,Filipa I. P. Samarra,Eva Egelyng Sigsgaard,Andrew D. Foote,Andrew D. Foote +14 more
TL;DR: The Enterprise Partnership Scheme Postgraduate Scholarship (EPSPG/2015/158) as mentioned in this paper was the first recipient of a postgraduate scholarship from the Irish Research Council (IRC).