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Kimberly A. Nevonen
Researcher at Oregon Health & Science University
Publications - 24
Citations - 680
Kimberly A. Nevonen is an academic researcher from Oregon Health & Science University. The author has contributed to research in topics: Gene & DNA methylation. The author has an hindex of 6, co-authored 19 publications receiving 486 citations. Previous affiliations of Kimberly A. Nevonen include Oregon National Primate Research Center.
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Journal ArticleDOI
Gibbon genome and the fast karyotype evolution of small apes
Lucia Carbone,R. Alan Harris,Sante Gnerre,Krishna R. Veeramah,Krishna R. Veeramah,Belen Lorente-Galdos,John Huddleston,John Huddleston,Thomas J. Meyer,Javier Herrero,Christian Roos,Bronwen Aken,Fabio Anaclerio,Nicoletta Archidiacono,Carl Baker,Daniel Barrell,Mark A. Batzer,Kathryn Beal,Antoine Blancher,Craig L. Bohrson,Markus Brameier,Michael S. Campbell,Oronzo Capozzi,Claudio Casola,Giorgia Chiatante,Andrew Cree,Annette Damert,Pieter J. de Jong,Laura Dumas,Marcos Fernandez-Callejo,Paul Flicek,Nina V. Fuchs,Gut I,Gut M,Matthew W. Hahn,Jessica Hernandez-Rodriguez,LaDeana W. Hillier,Robert Hubley,Bianca Ianc,Zsuzsanna Izsvák,Nina G. Jablonski,Laurel Johnstone,Anis Karimpour-Fard,Miriam K. Konkel,Dennis Kostka,Nathan H. Lazar,Sandra L. Lee,Lora Lewis,Yue Liu,Devin P. Locke,Swapan Mallick,Fernando L. Mendez,Fernando L. Mendez,Matthieu Muffato,Lynne V. Nazareth,Kimberly A. Nevonen,Majesta O'Bleness,Cornelia Ochis,Duncan T. Odom,Katherine S. Pollard,Javier Quilez,David Reich,Mariano Rocchi,Gerald G. Schumann,Stephen M. J. Searle,James M. Sikela,Gabriella Skollar,Arian F.A. Smit,Kemal Sonmez,Boudewijn F.H. Ten Hallers,Elizabeth Terhune,Gregg W.C. Thomas,Brygg Ullmer,Mario Ventura,Jerilyn A. Walker,Jeffrey D. Wall,Lutz Walter,Michelle C Ward,Michelle C Ward,Sarah J. Wheelan,Christopher W. Whelan,Christopher W. Whelan,Simon D. M. White,Larry J. Wilhelm,August E. Woerner,Mark Yandell,Baoli Zhu,Michael F. Hammer,Tomas Marques-Bonet,Tomas Marques-Bonet,Evan E. Eichler,Evan E. Eichler,Lucinda Fulton,Catrina Fronick,Donna M. Muzny,Wesley C. Warren,Kim C. Worley,Jeffrey Rogers,Richard K. Wilson,Richard A. Gibbs +99 more
TL;DR: The assembly and analysis of a northern white-cheeked gibbon genome is presented and the propensity for a gibbon-specific retrotransposon (LAVA) to insert into chromosome segregation genes and alter transcription by providing a premature termination site is described, suggesting a possible molecular mechanism for the genome plasticity of the gibbon lineage.
Journal ArticleDOI
Epigenetic maintenance of topological domains in the highly rearranged gibbon genome.
Nathan H. Lazar,Kimberly A. Nevonen,Brendan O'Connell,Christine C. McCann,Rachel J. O’Neill,Richard E. Green,Thomas J. Meyer,Mariam Okhovat,Lucia Carbone +8 more
TL;DR: It is found that gibbon rearrangements occur at TAD boundaries, independent of the parameters used to identify TADs, and it is shown that limited epigenetic homogenization occurs across breakpoints, irrespective of their time of occurrence in the gibbon lineage.
Journal ArticleDOI
Genomewide ancestry and divergence patterns from low-coverage sequencing data reveal a complex history of admixture in wild baboons.
Jeffrey D. Wall,Stephen A. Schlebusch,Susan C. Alberts,Laura A. Cox,Noah Snyder-Mackler,Kimberly A. Nevonen,Lucia Carbone,Lucia Carbone,Jenny Tung +8 more
TL;DR: The results provide valuable context for understanding the history of admixture in primates, including in the authors' own lineage, and suggest a complex process of intermittent contact that has occurred multiple times in baboon evolutionary history, despite no obvious fitness costs to hybrids or major geographic or behavioural barriers.
Journal ArticleDOI
Single-cell sequencing of primate preimplantation embryos reveals chromosome elimination via cellular fragmentation and blastomere exclusion.
Brittany L. Daughtry,Jimi L. Rosenkrantz,Nathan H. Lazar,Suzanne S. Fei,Nash Redmayne,Kristof A. Torkenczy,Andrew Adey,Melissa Y. Yan,Lina Gao,Byung Park,Kimberly A. Nevonen,Lucia Carbone,Shawn L. Chavez +12 more
TL;DR: It is suggested that embryos respond to chromosomal errors by encapsulation into micronuclei, elimination via cellular fragmentation, and selection against highly aneuploid blastomeres to overcome chromosome instability during preimplantation development.
Posted ContentDOI
Single-Cell Sequencing of Primate Preimplantation Embryos Reveals Chromosome Elimination Via Cellular Fragmentation and Blastomere Exclusion
Brittany L. Daughtry,Jimi L. Rosenkrantz,Nathan H. Lazar,Suzanne S. Fei,Nash Redmayne,Kristof A. Torkenczy,Andrew Adey,Lina Gao,Byung Park,Kimberly A. Nevonen,Lucia Carbone,Shawn L. Chavez +11 more
TL;DR: It is suggested that embryos respond to chromosomal errors by encapsulation into micronuclei, elimination by cellular fragmentation, and selection against highly aneuploid blastomeres to overcome chromosome instability during preimplantation development.