M
Mark Thompson
Researcher at Leiden University Medical Center
Publications - 64
Citations - 10256
Mark Thompson is an academic researcher from Leiden University Medical Center. The author has contributed to research in topics: Design space exploration & Electronic system-level design and verification. The author has an hindex of 21, co-authored 64 publications receiving 6854 citations. Previous affiliations of Mark Thompson include University of Amsterdam & University of Southampton.
Papers
More filters
Journal ArticleDOI
The FAIR Guiding Principles for scientific data management and stewardship
Mark Wilkinson,Michel Dumontier,IJsbrand Jan Aalbersberg,Gabrielle Appleton,Myles Axton,Arie Baak,Niklas Blomberg,Jan-Willem Boiten,Luiz Olavo Bonino da Silva Santos,Philip E. Bourne,Jildau Bouwman,Anthony J. Brookes,Timothy Clark,Mercè Crosas,Ingrid Dillo,Olivier G. Dumon,Scott C. Edmunds,Chris T. Evelo,Richard Finkers,Alejandra Gonzalez-Beltran,Alasdair J. G. Gray,Paul Groth,Carole Goble,Jeffrey S. Grethe,Jaap Heringa,Peter A C 't Hoen,Rob Hooft,Tobias Kuhn,Ruben Kok,Joost N. Kok,Scott J. Lusher,Maryann E. Martone,Albert Mons,Abel L. Packer,Bengt Persson,Philippe Rocca-Serra,Marco Roos,Rene van Schaik,Susanna-Assunta Sansone,Erik Anthony Schultes,Thierry Sengstag,Ted Slater,George Strawn,Morris A. Swertz,Mark Thompson,Johan van der Lei,Erik M. van Mulligen,Jan Velterop,Andra Waagmeester,Peter Wittenburg,Katherine Wolstencroft,Jun Zhao,Barend Mons,Barend Mons +53 more
TL;DR: The FAIR Data Principles as mentioned in this paper are a set of data reuse principles that focus on enhancing the ability of machines to automatically find and use the data, in addition to supporting its reuse by individuals.
Journal ArticleDOI
Gateways to the FANTOM5 promoter level mammalian expression atlas
Marina Lizio,Jayson Harshbarger,Hisashi Shimoji,Jessica Severin,Takeya Kasukawa,Serkan Sahin,Imad Abugessaisa,Shiro Fukuda,Fumi Hori,Sachi Ishikawa-Kato,Christopher J. Mungall,Erik Arner,J Kenneth Baillie,Nicolas Bertin,Hidemasa Bono,Michiel J. L. de Hoon,Alexander D. Diehl,Emmanuel Dimont,Tom C. Freeman,Kaori Fujieda,Winston Hide,Winston Hide,Rajaram Kaliyaperumal,Toshiaki Katayama,Timo Lassmann,Terrence F. Meehan,Koro Nishikata,Hiromasa Ono,Michael Rehli,Albin Sandelin,Erik Anthony Schultes,Erik Anthony Schultes,Peter A C 't Hoen,Zuotian Tatum,Mark Thompson,Tetsuro Toyoda,Derek W. Wright,Carsten O. Daub,Masayoshi Itoh,Piero Carninci,Yoshihide Hayashizaki,Alistair R. R. Forrest,Hideya Kawaji +42 more
TL;DR: The resulting data is assembled into a centralized data resource that contains web-based tools and data-access points for the research community to search and extract data related to samples, genes, promoter activities, transcription factors and enhancers across the FANTOM5 atlas.
Proceedings ArticleDOI
Ambient wood: designing new forms of digital augmentation for learning outdoors
Yvonne Rogers,Sara Price,Geraldine Fitzpatrick,Rowanne Fleck,Eric Harris,Hilary Smith,Cliff Randell,Henk Muller,Claire O'Malley,Danae Stanton,Mark Thompson,Mark J. Weal +11 more
TL;DR: An outdoors learning experience is designed, aimed at encouraging students to carry out contextualized scientific enquiry and to reflect on their interactions, with a framework of the different forms of digital augmentation and the different processes by which they can be accessed.
Journal ArticleDOI
Addendum: The FAIR Guiding Principles for scientific data management and stewardship
Mark Wilkinson,Michel Dumontier,IJsbrand Jan Aalbersberg,Gabrielle Appleton,Myles Axton,Arie Baak,Niklas Blomberg,Jan Willem Boiten,Luiz Olavo Bonino da Silva Santos,Philip E. Bourne,Jildau Bouwman,Anthony J. Brookes,Timothy Clark,Mercè Crosas,Ingrid Dillo,Olivier G. Dumon,Scott C. Edmunds,Chris T. Evelo,Richard Finkers,Alejandra Gonzalez-Beltran,Alasdair J. G. Gray,Paul Groth,Carole Goble,Jeffrey S. Grethe,Jaap Heringa,Peter A C 't Hoen,Rob Hooft,Tobias Kuhn,Ruben Kok,Joost N. Kok,Scott J. Lusher,Maryann E. Martone,Albert Mons,Abel L. Packer,Bengt Persson,Philippe Rocca-Serra,Marco Roos,Rene van Schaik,Susanna-Assunta Sansone,Erik Anthony Schultes,Thierry Sengstag,Ted Slater,George Strawn,Morris A. Swertz,Mark Thompson,Johan van der Lei,Erik M. van Mulligen,Jan Velterop,Andra Waagmeester,Peter Wittenburg,Katherine Wolstencroft,Jun Zhao,Barend Mons,Barend Mons +53 more
TL;DR: The FAIR Data Principles as discussed by the authors are a set of data reuse principles that focus on enhancing the ability of machines to automatically find and use the data, in addition to supporting its reuse by individuals.
Proceedings ArticleDOI
Daedalus: toward composable multimedia MP-SoC design
Hristo Nikolov,Mark Thompson,Todor Stefanov,Andy D. Pimentel,Simon Polstra,R. Bose,Claudiu Zissulescu,Ed F. Deprettere +7 more
TL;DR: This paper describes the first industrial deployment experiences with the Daedalus framework and performs a DSE study with a JPEG encoder application, which exploits both task and data parallelism.