M
Milinn Kremitzki
Researcher at Washington University in St. Louis
Publications - 16
Citations - 2844
Milinn Kremitzki is an academic researcher from Washington University in St. Louis. The author has contributed to research in topics: Genome & Reference genome. The author has an hindex of 13, co-authored 16 publications receiving 1633 citations. Previous affiliations of Milinn Kremitzki include University of Washington.
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Journal ArticleDOI
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
Valerie A. Schneider,Tina A. Graves-Lindsay,Kerstin Howe,Nathan Bouk,Hsiu-Chuan Chen,Paul Kitts,Terence Murphy,Kim D. Pruitt,Françoise Thibaud-Nissen,Derek Albracht,Robert S. Fulton,Milinn Kremitzki,Vincent Magrini,Chris Markovic,Sean McGrath,Karyn Meltz Steinberg,Kate Auger,William Chow,Joanna Collins,Glenn Harden,Tim Hubbard,Sarah Pelan,Jared T. Simpson,Glen Threadgold,James Torrance,Jonathan Wood,Laura Clarke,Sergey Koren,Matthew Boitano,Paul Peluso,Heng Li,Chen-Shan Chin,Adam M. Phillippy,Richard Durbin,Richard K. Wilson,Paul Flicek,Evan E. Eichler,Deanna M. Church +37 more
TL;DR: It is asserted that the collected updates in GRCh38 make the newer assembly a more robust substrate for comprehensive analyses that will promote the understanding of human biology and advance the efforts to improve health.
Journal ArticleDOI
Telomere-to-telomere assembly of a complete human X chromosome
Karen H. Miga,Sergey Koren,Arang Rhie,Mitchell R. Vollger,Ariel Gershman,Andrey Bzikadze,Shelise Brooks,Edmund Howe,David Porubsky,Glennis A. Logsdon,Valerie A. Schneider,Tamara A. Potapova,Jonathan Wood,William Chow,Joel Armstrong,Jeanne Fredrickson,Evgenia Pak,Kristof Tigyi,Milinn Kremitzki,Christopher Markovic,Valerie Maduro,Amalia Dutra,Gerard G. Bouffard,Alexander M. Chang,Nancy F. Hansen,Amy B. Wilfert,Françoise Thibaud-Nissen,Anthony D. Schmitt,Jon Matthew Belton,Siddarth Selvaraj,Megan Y. Dennis,Daniela C. Soto,Ruta Sahasrabudhe,Gulhan Kaya,Josh Quick,Nicholas J. Loman,Nadine Holmes,Matthew Loose,Urvashi Surti,Rosa Ana Risques,Tina A. Graves Lindsay,Robert S. Fulton,Ira M. Hall,Benedict Paten,Kerstin Howe,Winston Timp,Alice Young,James C. Mullikin,Pavel A. Pevzner,Jennifer L. Gerton,Beth A. Sullivan,Evan E. Eichler,Adam M. Phillippy +52 more
TL;DR: High-coverage, ultra-long-read nanopore sequencing is used to create a new human genome assembly that improves on the coverage and accuracy of the current reference (GRCh38) and includes the gap-free, telomere-to-telomere sequence of the X chromosome.
Journal ArticleDOI
Modernizing Reference Genome Assemblies
Deanna M. Church,Valerie A. Schneider,Tina Graves,Katherine Auger,Fiona Cunningham,Nathan Bouk,Hsiu Chuan Chen,Richa Agarwala,William M. McLaren,Graham R. S. Ritchie,Derek Albracht,Milinn Kremitzki,Susan M. Rock,Holland Kotkiewicz,Colin Kremitzki,Aye Wollam,Lee Trani,Lucinda Fulton,Robert S. Fulton,Lucy Matthews,S. Whitehead,William Chow,James Torrance,Matthew Dunn,Glenn Harden,Glen Threadgold,Jonathan Wood,Joanna Collins,Paul Heath,Guy Griffiths,Sarah Pelan,Darren Grafham,Evan E. Eichler,Evan E. Eichler,George M. Weinstock,Elaine R. Mardis,Richard K. Wilson,Kerstin Howe,Paul Flicek,Tim Hubbard +39 more
TL;DR: Support for this work came from the Intramural Research Program of the NIH, The National Library of Medicine, the European Molecular Biology Laboratory, the Wellcome Trust, and the Howard Hughes Medical Institute.
Journal ArticleDOI
A New Chicken Genome Assembly Provides Insight into Avian Genome Structure
Wesley C. Warren,LaDeana W. Hillier,Chad Tomlinson,Patrick Minx,Milinn Kremitzki,Tina Graves,Chris Markovic,Nathan Bouk,Kim D. Pruitt,Françoise Thibaud-Nissen,Valerie A. Schneider,Tamer A. Mansour,C. Titus Brown,Aleksey V. Zimin,Rachel Hawken,Mitch Abrahamsen,Alexis B. Pyrkosz,Mireille Morisson,Valerie Fillon,Alain Vignal,William Chow,Kerstin Howe,Janet E. Fulton,Marcia M. Miller,Peter V. Lovell,Claudio V. Mello,Morgan Wirthlin,Andrew S. Mason,Richard Kuo,David W. Burt,Jerry B. Dodgson,Hans H. Cheng +31 more
TL;DR: A new version of the chicken genome assembly is presented, built from combined long single molecule sequencing technology, finished BACs, and improved physical maps, and revisited the question of what genes are missing in the avian lineage, and found that a large fraction of the original set of missing genes are still absent in sequenced bird species.
Posted ContentDOI
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
Valerie A. Schneider,Tina A. Graves-Lindsay,Kerstin Howe,Nathan Bouk,Hsiu-Chuan Chen,Paul Kitts,Terence Murphy,Kim D. Pruitt,Françoise Thibaud-Nissen,Derek Albracht,Robert S. Fulton,Milinn Kremitzki,Vincent Magrini,Chris Markovic,Sean McGrath,Karyn Meltz Steinberg,Kate Auger,William Chow,Joanna Collins,Glenn Harden,Tim Hubbard,Sarah Pelan,Jared T. Simpson,Glen Threadgold,James Torrance,Jonathan Wood,Laura Clarke,Sergey Koren,Matthew Boitano,Heng Li,Chen-Shan Chin,Adam M. Phillippy,Richard Durbin,Richard K. Wilson,Paul Flicek,Deanna M. Church +35 more
TL;DR: It is asserted that the collected updates in GRCh38 make the newer assembly a more robust substrate for comprehensive analyses that will promote the understanding of human biology and advance the efforts to improve health.