M
Ming Tsai
Researcher at Stanford University
Publications - 7
Citations - 970
Ming Tsai is an academic researcher from Stanford University. The author has contributed to research in topics: Chromosome 16 & Gene. The author has an hindex of 7, co-authored 7 publications receiving 897 citations.
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Journal ArticleDOI
The DNA sequence and biology of human chromosome 19
Jane Grimwood,Laurie Gordon,Laurie Gordon,Anne S. Olsen,Anne S. Olsen,Astrid Terry,Jeremy Schmutz,Jane Lamerdin,Jane Lamerdin,Uffe Hellsten,David Goodstein,Olivier Couronne,Mary Bao Tran-Gyamfi,Mary Bao Tran-Gyamfi,Andrea Aerts,Michael R. Altherr,Michael R. Altherr,Linda K. Ashworth,Linda K. Ashworth,Eva Bajorek,Stacey Black,Elbert Branscomb,Elbert Branscomb,Sean Caenepeel,Anthony V. Carrano,Anthony V. Carrano,Chenier Caoile,Yee Man Chan,Mari Christensen,Mari Christensen,Catherine A. Cleland,Catherine A. Cleland,Alex Copeland,Eileen Dalin,Paramvir S. Dehal,Mirian Denys,John C. Detter,Julio Escobar,Dave Flowers,Dea Fotopulos,Carmen Rosa Albacete García,Anca M. Georgescu,Anca M. Georgescu,Tijana Glavina,Maria Gomez,Eidelyn Gonzales,Matthew Groza,Matthew Groza,Nancy Hammon,Trevor Hawkins,Lauren Haydu,Isaac Ho,Wayne Huang,Sanjay Israni,Jamie Jett,Kristen Kadner,Heather Kimball,Arthur Kobayashi,Arthur Kobayashi,Vladimer Larionov,Sun-Hee Leem,Frederick Lopez,Yunian Lou,Steve Lowry,Stephanie Malfatti,Stephanie Malfatti,Diego Martinez,Paula McCready,Paula McCready,Catherine Medina,Jenna Morgan,Kathryn Nelson,Kathryn Nelson,Matt Nolan,Ivan Ovcharenko,Ivan Ovcharenko,Sam Pitluck,Martin Pollard,Anthony P. Popkie,Paul Predki,Glenda Quan,Glenda Quan,Lucía Ramírez,Sam Rash,James Retterer,Alex Rodriguez,Stephanine Rogers,Asaf Salamov,Angelica Salazar,Xinwei She,Doug Smith,Tom Slezak,Tom Slezak,Victor V. Solovyev,Nina Thayer,Nina Thayer,Hope Tice,Ming Tsai,Anna Ustaszewska,Nu Vo,Mark C. Wagner,Mark C. Wagner,Jeremy Wheeler,Kevin Wu,Gary Xie,Gary Xie,Joan Yang,Inna Dubchak,Terrence S. Furey,Pieter J. deJong,Mark Dickson,David Gordon,Evan E. Eichler,Len A. Pennacchio,Paul G. Richardson,Lisa Stubbs,Lisa Stubbs,Daniel S. Rokhsar,Richard M. Myers,Edward M. Rubin,Susan Lucas +120 more
TL;DR: Comparative analyses show a fascinating picture of conservation and divergence, revealing large blocks of gene orthology with rodents, scattered regions with more recent gene family expansions and deletions, and segments of coding and non-coding conservation with the distant fish species Takifugu.
Journal ArticleDOI
Quality assessment of the human genome sequence
Jeremy Schmutz,Jeremy Wheeler,Jane Grimwood,Mark Dickson,Joan Yang,Chenier Caoile,Eva Bajorek,Stacey Black,Yee Man Chan,Mirian Denys,Julio Escobar,Dave Flowers,Dea Fotopulos,Carmen Rosa Albacete García,M. Gómez,Eidelyn Gonzales,Lauren Haydu,Frederick Lopez,Lucía Ramírez,James Retterer,Alex Rodriguez,Stephanie Rogers,Angelica Salazar,Ming Tsai,Richard M. Myers +24 more
TL;DR: The results of the largest examination of the quality of the finished DNA sequence are presented, based on a rigorous combination of laboratory experiments and computational analysis.
Journal ArticleDOI
The sequence and analysis of duplication-rich human chromosome 16
Joel Martin,Cliff Han,Laurie Gordon,Astrid Terry,Shyam Prabhakar,Xinwei She,Gary Xie,Gary Xie,Uffe Hellsten,Yee Man Chan,Michael R. Altherr,Michael R. Altherr,Olivier Couronne,Andrea Aerts,Eva Bajorek,Stacey Black,Heather Blumer,Elbert Branscomb,Elbert Branscomb,Nancy C. Brown,William J. Bruno,Judith M. Buckingham,David F. Callen,Connie S. Campbell,Mary L. Campbell,E.W. Campbell,Chenier Caoile,Jean F. Challacombe,Leslie Chasteen,Olga Chertkov,Han C. Chi,Mari Christensen,Lynn M. Clark,Judith D. Cohn,Mirian Denys,John C. Detter,Mark Dickson,Mira Dimitrijevic-Bussod,Julio Escobar,Joseph J. Fawcett,Dave Flowers,Dea Fotopulos,Tijana Glavina,Maria Gomez,Eidelyn Gonzales,David Goodstein,Lynne Goodwin,Deborah L. Grady,Igor V. Grigoriev,Matthew Groza,Nancy Hammon,Trevor Hawkins,Lauren Haydu,C.E. Hildebrand,Wayne Huang,Sanjay Israni,Jamie Jett,Phillip B. Jewett,Kristen Kadner,Heather Kimball,Arthur Kobayashi,Arthur Kobayashi,Marie-Claude Krawczyk,Tina Leyba,Jonathan L. Longmire,Frederick Lopez,Yunian Lou,Steve Lowry,Thom Ludeman,Chitra Manohar,Graham A. Mark,Kimberly L. Mcmurray,Linda Meincke,Jenna Morgan,Robert K. Moyzis,Mark Mundt,A. Christine Munk,Richard D. Nandkeshwar,Sam Pitluck,Martin Pollard,Paul Predki,B. Parson-Quintana,Lucía Ramírez,Sam Rash,James Retterer,Darryl O. Ricke,Donna L. Robinson,Alex Rodriguez,Asaf Salamov,Elizabeth Saunders,D. Scott,Timothy Shough,Raymond L. Stallings,Malinda Stalvey,Robert D. Sutherland,Roxanne Tapia,Judith G. Tesmer,Nina Thayer,Nina Thayer,Linda S. Thompson,Hope Tice,David C. Torney,Mary Bao Tran-Gyamfi,Ming Tsai,Levy E. Ulanovsky,Anna Ustaszewska,Nu Vo,P. Scott White,Albert L. Williams,Patricia L. Wills,Jung-Rung Wu,Kevin Wu,Joan Yang,Pieter J. deJong,David Bruce,Norman A. Doggett,Larry L. Deaven,Jeremy Schmutz,Jane Grimwood,Paul G. Richardson,Daniel S. Rokhsar,Evan E. Eichler,Paul Gilna,Susan Lucas,Richard M. Myers,Edward M. Rubin,Edward M. Rubin,Len A. Pennacchio,Len A. Pennacchio +128 more
TL;DR: The 78,884,754 base pairs of finished chromosome 16 sequence, representing over 99.9% of its euchromatin, revealed 880 protein-coding genes, including metallothionein, cadherin and iroquois gene families, as well as the disease genes for polycystic kidney disease and acute myelomonocytic leukaemia.
Journal Article
The sequence and analysis of duplication rich human chromosome 16
Joel Martin,Cliff Han,Laurie Gordon,Astrid Terry,Shyam Prabhakar,Xinwei She,Gary Xie,Uffe Hellsten,Yee Man Chan,Michael R. Altherr,Olivier Couronne,Andrea Aerts,Eva Bajorek,Stacey Black,Heather Blumer,Elbert Branscomb,Nancy C. Brown,William J. Bruno,Judith M. Buckingham,David F. Callen,Connie S. Campbell,Mary L. Campbell,E.W. Campbell,Chenier Caoile,Jean F. Challacombe,Leslie Chasteen,Olga Chertkov,Han C. Chi,Mari Christensen,Lynn M. Clark,Judith D. Cohn,Mirian Denys,John C. Detter,Mark Dickson,Mira Dimitrijevic-Bussod,Julio Escobar,Joseph J. Fawcett,Dave Flowers,Dea Fotopulos,Tijana Glavina,María Laura Ríos Gómez,Eidelyn Gonzales,David Goodstein,Lynne Goodwin,Deborah L. Grady,Igor V. Grigoriev,Matthew Groza,Nancy Hammon,Trevor Hawkins,Lauren Haydu,C.E. Hildebrand,Wayne Huang,Sanjay Israni,Jamie Jett,Phillip E. Jewett,Kristen Kadner,Heather Kimball,Arthur Kobayashi,Marie-Claude Krawczyk,Tina Leyba,Jonathan L. Longmire,Frederick Lopez,Yunian Lou,Steve Lowry,Thom Ludeman,Graham A. Mark,Kimberly L. Mcmurray,Linda Meincke,Jenna Morgan,Robert K. Moyzis,Mark Mundt,A. Christine Munk,Richard D. Nandkeshwar,Sam Pitluck,Martin O. Pollard,Paul Predki,B. Parson-Quintana,Lucía Ramírez,Sam Rash,James Retterer,Darryl O. Ricke,Donna L. Robinson,Alex Rodriguez,Asaf Salamov,Elizabeth Saunders,D. Scott,Timothy Shough,Raymond L. Stallings,Malinda Stalvey,Robert D. Sutherland,Roxanne Tapia,Judith G. Tesmer,Nina Thayer,Linda S. Thompson,Hope Tice,David C. Torney,Mary Bao Tran-Gyamfi,Ming Tsai,Levy E. Ulanovsky,Anna Ustaszewska,Nu Vo,P. Scott White,Albert L. Williams,Patricia L. Wills,Jung-Rung Wu,Kevin Wu,Joan Yang,Pieter J. deJong,David Bruce,Norman A. Doggett,Larry L. Deaven,Jeremy Schmutz,Jane Grimwood,Paul G. Richardson,Daniel S. Rokhsar,Evan E. Eichler,Paul Gilna,Susan Lucas,Richard M. Myers,Edward M. Rubin,Len A. Pennacchio +120 more
TL;DR: In this paper, the authors reported the 78,884,754 base pairs of the human chromosome 16 sequence, representing over 99.9 percent of its euchromatin, were annotated with 880 protein coding genes.
Journal ArticleDOI
The complete sequence of human chromosome 5
Jeremy Schmutz,Joel Martin,Astrid Terry,Olivier Couronne,Jane Grimwood,State Lowry,Laurie Gordon,D. Scott,Gary Xie,Wayne Huang,Uffe Hellsten,Mary Bao Tran-Gyamfi,Xinwei She,Shyam Prabhakar,Andrea Aerts,Michael R. Altherr,Eva Bajorek,Stacey Black,Elbert Branscomb,Chenier Caoile,Jean F. Challacombe,Yee Man Chan,Mirian Denys,Chris Detter,Julio Escobar,Dave Flowers,Dea Fotopulos,Tijana Glavina,María Laura Ríos Gómez,Eidelyn Gonzales,David Goodstenin,Igor V. Grigoriev,Matthew Groza,Nancy Hammon,Trevor Hawkins,Lauren Haydu,Sanjay Israni,Jamie Jett,Kristen Kadner,Heather Kimbal,Arthur Kobayashi,Frederick Lopez,Yunian Lou,Diego Martinez,Catherine Medina,Jenna Morgan,Richard D. Nandkeshwar,James P. Noonan,Sam Pitluck,Martin O. Pollard,Paul Predki,James Priest,Lucía Ramírez,Sam Rash,James Retterer,Alex Rodriguez,Stephanie Rogers,Asaf Salamov,Angelica Salazar,Nina Thayer,Hope Tice,Ming Tsai,Anna Ustaszewska,Nu Vo,Jeremy Wheeler,Kevin Wu,Joan Yang,Mark Dickson,Jan Fang Cheng,Evan E. Eichler,Anne O. Olsen,Len A. Pennacchio,Daniel S. Rokhsar,Paul G. Richardson,Susan Lucas,Richard M. Myers,Edward M. Rubin +76 more
TL;DR: This work has compiled 177.7 million base pairs of highly accurate finished sequence containing 923 manually curated protein-encoding genes including the protocadherin and interleukin gene families and the first complete versions of each of the large chromosome 5 specific internal duplications.