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Xihui Lin
Researcher at Ontario Institute for Cancer Research
Publications - 22
Citations - 1038
Xihui Lin is an academic researcher from Ontario Institute for Cancer Research. The author has contributed to research in topics: Medicine & Non-negative matrix factorization. The author has an hindex of 10, co-authored 14 publications receiving 796 citations.
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Journal ArticleDOI
Genomic hallmarks of localized, non-indolent prostate cancer
Michael Fraser,Veronica Y. Sabelnykova,Takafumi N. Yamaguchi,Lawrence E. Heisler,Julie Livingstone,Vincent Huang,Yu Jia Shiah,Fouad Yousif,Xihui Lin,Andre P. Masella,Natalie S. Fox,Natalie S. Fox,Michael Xie,Stephenie D. Prokopec,Alejandro Berlin,Emilie Lalonde,Emilie Lalonde,Musaddeque Ahmed,Dominique Trudel,Xuemei Luo,Timothy Beck,Alice Meng,Junyan Zhang,Alister D'Costa,Robert E. Denroche,Haiying Kong,Shadrielle Melijah G. Espiritu,Melvin L.K. Chua,Ada Wong,Taryne Chong,Michelle Sam,Jeremy Johns,Lee Timms,Nicholas Buchner,Michèle Orain,Valérie Picard,Hélène Hovington,Alexander Murison,Ken Kron,Nicholas J. Harding,Christine P'ng,Kathleen E. Houlahan,Kenneth C. Chu,Bryan Lo,Francis Nguyen,Constance H. Li,Constance H. Li,Ren X. Sun,Ren X. Sun,Richard de Borja,Christopher I Cooper,Julia F. Hopkins,Shaylan K. Govind,Clement Fung,Daryl Waggott,Jeffrey Green,Syed Haider,Michelle Chan-Seng-Yue,Esther Jung,Zhiyuan Wang,Alain Bergeron,Alan Dal Pra,Louis Lacombe,Colin Collins,Colin Collins,Cenk Sahinalp,Mathieu Lupien,Mathieu Lupien,Neil E. Fleshner,Housheng Hansen He,Housheng Hansen He,Yves Fradet,Bernard Têtu,Theodorus van der Kwast,John Douglas Mcpherson,John Douglas Mcpherson,Robert G. Bristow,Robert G. Bristow,Paul C. Boutros,Paul C. Boutros +79 more
TL;DR: It is suggested that intensified treatment of genomically aggressive localized prostate cancer may improve cure rates and numerous molecular aberrations were prognostic for disease recurrence, including several DNA methylation events, and a signature comprised of these aberration outperformed well-described prognostic biomarkers.
Journal ArticleDOI
Prediction of overall survival for patients with metastatic castration-resistant prostate cancer: development of a prognostic model through a crowdsourced challenge with open clinical trial data
Justin Guinney,Tao Wang,Teemu D. Laajala,Teemu D. Laajala,Kimberly Kanigel Winner,J. Christopher Bare,Elias Chaibub Neto,Suleiman A. Khan,Gopal Peddinti,Antti Airola,Tapio Pahikkala,Tuomas Mirtti,Thomas Yu,Brian M. Bot,Liji Shen,Kald Abdallah,Thea Norman,Stephen H. Friend,Gustavo Stolovitzky,Howard R. Soule,Christopher Sweeney,Charles J. Ryan,Howard I. Scher,Oliver Sartor,Yang Xie,Tero Aittokallio,Tero Aittokallio,Fang Liz Zhou,James C. Costello,Catalina Anghe,Helia Azima,Robert Baertsch,Pedro J Ballester,Chris Bare,Vinayak Bhandari,Cuong C Dang,Maria Bekker-Nielsen Dunbar,Ann-Sophie Buchardt,Ljubomir Buturovic,Da Cao,Prabhakar Chalise,Junwoo Cho,Tzu-Ming Chu,R Yates Coley,Sailesh Conjeti,Sara Correia,Ziwei Dai,Junqiang Dai,Philip Dargatz,Sam Delavarkhan,Detian Deng,Ankur Dhanik,Yu Du,Aparna Elangovan,Shellie D. Ellis,Laura L. Elo,Shadrielle Melijah G. Espiritu,Fan Fan,Ashkan B Farshi,Ana Freitas,Brooke L. Fridley,Christiane Fuchs,Eyal Gofer,Gopalacharyulu Peddinti,Stefan Graw,Russell Greiner,Yuanfang Guan,Jing Guo,Pankaj Gupta,Anna I Guyer,Jiawei Han,Niels Richard Hansen,Billy Hw Chang,Outi Hirvonen,Barbara Huang,Chao Huang,Jinseub Hwang,Joseph G. Ibrahim,Vivek Jayaswa,Jouhyun Jeon,Zhicheng Ji,Deekshith Juvvadi,Sirkku Jyrkkiö,Kimberly Kanigel-Winner,Amin Katouzian,Marat D. Kazanov,Shahin Khayyer,Dalho Kim,Agnieszka Kitlas Golińska,Devin C. Koestler,Fernanda Kokowicz,Ivan Kondofersky,Norbert Krautenbacher,Damjan Krstajic,Luke Kumar,Christoph Kurz,Matthew Kyan,Michael Laimighofer,Eunjee Lee,Wojciech Lesinski,Miaozhu Li,Ye Li,Qiuyu Lian,Xiaotao Liang,Minseong Lim,Henry Lin,Xihui Lin,Jing Lu,Mehrad Mahmoudian,Roozbeh Manshaei,Richard Meier,Dejan Miljkovic,Krzysztof Mnich,Nassir Navab,Elias Chaibub Neto,Yulia Newton,Subhabrata Pal,Byeongju Park,Jaykumar Patel,Swetabh Pathak,Alejandrina Pattin,Donna P. Ankerst,Jian Peng,Anne H Petersen,Robin Philip,Stephen R. Piccolo,Sebastian Pölsterl,Aneta Polewko-Klim,Karthik Rao,Xiang Ren,Miguel Rocha,Witold R. Rudnicki,Witold R. Rudnicki,Hyunnam Ryu,Hagen Scherb,Raghav Sehgal,Fatemeh Seyednasrollah,Jingbo Shang,Bin Shao,Howard Sher,Motoki Shiga,Artem Sokolov,Julia F. Söllner,Lei Song,Josh Stuart,Ren Sun,Nazanin Tahmasebi,Kar-Tong Tan,Lisbeth Tomaziu,Joseph Usset,Yeeleng S Vang,Roberto Vega,Vítor Vieira,David Wang,Difei Wang,Junmei Wang,Lichao Wang,Sheng Wang,Yue Wang,Russell D. Wolfinger,Christopher K. Wong,Zhenke Wu,Jinfeng Xiao,Xiaohui Xie,Doris Xin,Hojin Yang,Nancy Yu,Xiang Yu,Sulmaz Zahedi,Massimiliano Zanin,Chihao Zhang,Jingwen Zhang,Shihua Zhang,Yanchun Zhang,Hongtu Zhu,Shanfeng Zhu,Yuxin Zhu +176 more
TL;DR: 50 independent methods were developed to predict overall survival and were evaluated through the DREAM challenge, and the top performer was based on an ensemble of penalised Cox regression models (ePCR), which uniquely identified predictive interaction effects with immune biomarkers and markers of hepatic and renal function.
Journal ArticleDOI
Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease
Genevera I. Allen,Nicola Amoroso,Nicola Amoroso,Catalina Anghel,Venkatachalapathy S. K. Balagurusamy,Christopher Bare,Derek Beaton,Roberto Bellotti,Roberto Bellotti,David A. Bennett,Kevin L. Boehme,Paul C. Boutros,Paul C. Boutros,Laura Caberlotto,Cristian Caloian,Frederick Campbell,Elias Chaibub Neto,Yu Chuan Chang,Beibei Chen,Chien-Yu Chen,Ting Ying Chien,Timothy Clark,Sudeshna Das,Christos Davatzikos,Jieyao Deng,Donna N. Dillenberger,Richard Dobson,Richard Dobson,Richard Dobson,Qilin Dong,Jimit Doshi,Denise Duma,R. Errico,Guray Erus,Evan Everett,David W. Fardo,Stephen H. Friend,Holger Fröhlich,Jessica Gan,Peter St George-Hyslop,Satrajit S. Ghosh,Satrajit S. Ghosh,Enrico Glaab,Robert C. Green,Yuanfang Guan,Ming Yi Hong,Chao Huang,Jinseub Hwang,Joseph G. Ibrahim,Paolo Inglese,Anandhi Iyappan,Anandhi Iyappan,Qijia Jiang,Yuriko Katsumata,John S. K. Kauwe,Arno Klein,Dehan Kong,Roland Krause,Emilie Lalonde,Mario Lauria,Eunjee Lee,Xihui Lin,Zhandong Liu,Julie Livingstone,Benjamin A. Logsdon,Simon Lovestone,Tsung Wei Ma,Ashutosh Malhotra,Ashutosh Malhotra,Lara M. Mangravite,Taylor J. Maxwell,Emily Merrill,John Nagorski,Aishwarya Alex Namasivayam,Manjari Narayan,Mufassra Naz,Mufassra Naz,Stephen Newhouse,Thea Norman,Ramil N. Nurtdinov,Yen Jen Oyang,Yudi Pawitan,Shengwen Peng,Mette A. Peters,Stephen R. Piccolo,Paurush Praveen,Paurush Praveen,Corrado Priami,Veronica Y. Sabelnykova,Philipp Senger,Xia Shen,Xia Shen,Andrew Simmons,Aristeidis Sotiras,Gustavo Stolovitzky,Gustavo Stolovitzky,Sabina Tangaro,Andrea Tateo,Yi-An Tung,Nicholas J. Tustison,Erdem Varol,George Vradenburg,Michael W. Weiner,Guanghua Xiao,Lei Xie,Yang Xie,Jia Xu,Hojin Yang,Xiaowei Zhan,Yunyun Zhou,Zhu Fan,Hongtu Zhu,Shanfeng Zhu +112 more
TL;DR: A meta‐analysis of the state of the art in predicting cognitive outcomes in Alzheimer's disease based on high dimensional, publicly available genetic and structural imaging data failed to identify a meaningful predictor developed from either data modality.
Journal ArticleDOI
The Immune Microenvironment, Genome-wide Copy Number Aberrations, and Survival in Mesothelioma.
Bibhusal Thapa,Adriana Salcedo,Xihui Lin,Marzena Walkiewicz,Carmel Murone,Malaka Ameratunga,K. Asadi,Siddhartha Deb,Stephen Barnett,Simon R. Knight,Paul Mitchell,D. Neil Watkins,Paul C. Boutros,Paul C. Boutros,Thomas John +14 more
TL;DR: PD‐L1 expression was associated with nonepithelioid MPM, poor clinical outcome, and increased immunological infiltrates and copy number aberrations.
Journal ArticleDOI
PD-L1 and Tumor Infiltrating Lymphocytes as Prognostic Markers in Resected NSCLC.
Malaka Ameratunga,Khashayar Asadi,Xihui Lin,Marzena Walkiewicz,Carmel Murone,Simon R. Knight,Paul Mitchell,Paul C. Boutros,Paul C. Boutros,Thomas John +9 more
TL;DR: In patients with N2 disease, strong PD-L1 expression was associated with significantly improved disease-free (DFS) and overall survival (OS) in multivariate analysis, and the observed survival benefit in N1 disease requires confirmation.