Z
Zhanyou Xu
Researcher at Texas A&M University
Publications - 14
Citations - 1285
Zhanyou Xu is an academic researcher from Texas A&M University. The author has contributed to research in topics: Genome & Contig. The author has an hindex of 9, co-authored 9 publications receiving 1193 citations.
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Journal ArticleDOI
Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis
Brett M. Tyler,Sucheta Tripathy,Xuemin Zhang,Paramvir S. Dehal,Paramvir S. Dehal,Rays H. Y. Jiang,Rays H. Y. Jiang,Andrea Aerts,Andrea Aerts,Felipe D. Arredondo,Laura Baxter,Douda Bensasson,Douda Bensasson,Douda Bensasson,Jim Beynon,Jarrod Chapman,Jarrod Chapman,Jarrod Chapman,C. M. B. Damasceno,Anne E. Dorrance,Daolong Dou,Allan W. Dickerman,Inna Dubchak,Inna Dubchak,Matteo Garbelotto,Mark Gijzen,Stuart G. Gordon,Francine Govers,Niklaus J. Grünwald,Wayne Huang,Wayne Huang,Kelly Ivors,Kelly Ivors,Richard W. Jones,Sophien Kamoun,Konstantinos Krampis,Kurt Lamour,Mi-Kyung Lee,W. Hayes McDonald,MoÌnica Medina,Harold J. G. Meijer,Eric K. Nordberg,Donald J. Maclean,Manuel D. Ospina-Giraldo,Paul Morris,Vipaporn Phuntumart,Nicholas H. Putnam,Nicholas H. Putnam,Sam Rash,Sam Rash,Jocelyn K. C. Rose,Yasuko Sakihama,Asaf Salamov,Asaf Salamov,Alon Savidor,Chantel F. Scheuring,Brian M. Smith,Bruno W. S. Sobral,Astrid Terry,Astrid Terry,Trudy Torto-Alalibo,Joe Win,Zhanyou Xu,Hong-Bin Zhang,Igor V. Grigoriev,Igor V. Grigoriev,Daniel S. Rokhsar,Daniel S. Rokhsar,Jeffrey L. Boore +68 more
TL;DR: Comparison of the two species' genomes reveals a rapid expansion and diversification of many protein families associated with plant infection such as hydrolases, ABC transporters, protein toxins, proteinase inhibitors, and, in particular, a superfamily of 700 proteins with similarity to known oömycete avirulence genes.
Journal ArticleDOI
Cloning, characterization, and evolution of the NBS-LRR-encoding resistance gene analogue family in polyploid cotton (Gossypium hirsutum L.).
Limei He,Chunguang Du,Lina Covaleda,Zhanyou Xu,A. Forest Robinson,John Z. Yu,Russell J. Kohel,Hong-Bin Zhang +7 more
TL;DR: Sequence analysis revealed that RGA are abundant and highly diverged in the cotton genome and could be categorized into 10 distinct subfam families based on the similarities of their nucleotide sequences, and gene index analysis showed that each of the subfamilies is at a different stage of RGA family evolution.
Journal ArticleDOI
Genome physical mapping with large-insert bacterial clones by fingerprint analysis: methodologies, source clone genome coverage, and contig map quality.
Zhanyou Xu,Shuku Sun,Lina Covaleda,Kejiao Ding,Aimin Zhang,Aimin Zhang,Chengcang Wu,Chantel F. Scheuring,Hong-Bin Zhang +8 more
TL;DR: Two new capillary electrophoresis-based fingerprinting methods for genome physical mapping are reported and the effects of different fingerprinted methods and source clone genome coverage on quality physical map construction revealed by computer simulations and laboratory experiments are revealed.
Supporting Online Material for Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis
Brett M. Tyler,Sucheta Tripathy,Xuemin Zhang,Paramvir S. Dehal,Rays H. Y. Jiang,Andrea Aerts,Felipe D. Arredondo,Laura Baxter,Douda Bensasson,Jim Beynon,Jarrod Chapman,C. M. B. Damasceno,Anne E. Dorrance,Daolong Dou,Allan W. Dickerman,Inna Dubchak,Matteo Garbelotto,Mark Gijzen,Stuart G. Gordon,Francine Govers,Niklaus J. Grünwald,Wayne Huang,Kelly Ivors,Richard W. Jones,Sophien Kamoun,Kurt Lamour,Mi-Kyung Lee,W. Hayes McDonald,Mónica Medina,Harold J. G. Meijer,Eric K. Nordberg,Donald J. Maclean,Manuel D. Ospina-Giraldo,Paul Morris,Nicholas H. Putnam,Sam Rash,Jocelyn K. C. Rose,Yasuko Sakihama,Asaf Salamov,Alon Savidor,Chantel F. Scheuring,Brian M. Smith,Bruno S. Sobral,Astrid Terry,Trudy Torto-Alalibo,Zhanyou Xu,Hong-Bin Zhang,Igor V. Grigoriev,Daniel S. Rokhsar,Jeffrey L. Boore +49 more
TL;DR: Brett M. Tyler,* Sucheta Tripathy, Xuemin Zhang, Paramvir Dehal, Rays H. Y. Lamour, Mi-Kyung Lee, W. S. Smith, Bruno W. Rokhsar, Jeffrey L. Scheuring, Brian M. Morris, Vipaporn Phuntumart, Nicholas H.
Journal ArticleDOI
An integrated BAC and genome sequence physical map of Phytophthora sojae.
Xuemin Zhang,Chantel F. Scheuring,Sucheta Tripathy,Zhanyou Xu,Chengcang Wu,Angela Ko,S. Ken Tian,Felipe R. Arredondo,Mi-Kyung Lee,Felipe A. Santos,Rays H. Y. Jiang,Hong-Bin Zhang,Brett M. Tyler +12 more
TL;DR: The map represents the first genome-wide physical map of a Phytophthora sp.