Showing papers by "National Ocean Service published in 2015"

Vulnerability and adaptation of US shellfisheries to ocean acidification

Abstract: Ocean acidification is a global, long-term problem whose ultimate solution requires carbon dioxide reduction at a scope and scale that will take decades to accomplish successfully. Until that is achieved, feasible and locally relevant adaptation and mitigation measures are needed. To help to prioritize societal responses to ocean acidification, we present a spatially explicit, multi disciplinary vulnerability analysis of coastal human communities in the United States. We focus our analysis on shelled mollusc harvests, which are likely to be harmed by ocean acidification. Our results highlight US regions most vulnerable to ocean acidification (and why), important knowledge and information gaps, and opportunities to adapt through local actions. The research illustrates the benefits of integrating natural and social sciences to identify actions and other opportunities while policy, stakeholders and scientists are still in relatively early stages of developing research plans and responses to ocean acidification.

The ocean sampling day consortium

Abstract: Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world’s oceans. It is a simultaneous global mega-sequencing campaign aiming to generate the largest standardized microbial data set in a single day. This will be achievable only through the coordinated efforts of an Ocean Sampling Day Consortium, supportive partnerships and networks between sites. This commentary outlines the establishment, function and aims of the Consortium and describes our vision for a sustainable study of marine microbial communities and their embedded functional traits.

Adrenal Gland and Lung Lesions in Gulf of Mexico Common Bottlenose Dolphins (Tursiops truncatus) Found Dead following the Deepwater Horizon Oil Spill

Abstract: A northern Gulf of Mexico (GoM) cetacean unusual mortality event (UME) involving primarily bottlenose dolphins (Tursiops truncatus) in Louisiana, Mississippi, and Alabama began in February 2010 and continued into 2014. Overlapping in time and space with this UME was the Deepwater Horizon (DWH) oil spill, which was proposed as a contributing cause of adrenal disease, lung disease, and poor health in live dolphins examined during 2011 in Barataria Bay, Louisiana. To assess potential contributing factors and causes of deaths for stranded UME dolphins from June 2010 through December 2012, lung and adrenal gland tissues were histologically evaluated from 46 fresh dead non-perinatal carcasses that stranded in Louisiana (including 22 from Barataria Bay), Mississippi, and Alabama. UME dolphins were tested for evidence of biotoxicosis, morbillivirus infection, and brucellosis. Results were compared to up to 106 fresh dead stranded dolphins from outside the UME area or prior to the DWH spill. UME dolphins were more likely to have primary bacterial pneumonia (22% compared to 2% in non-UME dolphins, P = .003) and thin adrenal cortices (33% compared to 7% in non-UME dolphins, P = .003). In 70% of UME dolphins with primary bacterial pneumonia, the condition either caused or contributed significantly to death. Brucellosis and morbillivirus infections were detected in 7% and 11% of UME dolphins, respectively, and biotoxin levels were low or below the detection limit, indicating that these were not primary causes of the current UME. The rare, life-threatening, and chronic adrenal gland and lung diseases identified in stranded UME dolphins are consistent with exposure to petroleum compounds as seen in other mammals. Exposure of dolphins to elevated petroleum compounds present in coastal GoM waters during and after the DWH oil spill is proposed as a cause of adrenal and lung disease and as a contributor to increased dolphin deaths.

Living Shorelines: Coastal Resilience with a Blue Carbon Benefit.

Abstract: Living shorelines are a type of estuarine shoreline erosion control that incorporates native vegetation and preserves native habitats. Because they provide the ecosystem services associated with natural coastal wetlands while also increasing shoreline resilience, living shorelines are part of the natural and hybrid infrastructure approach to coastal resiliency. Marshes created as living shorelines are typically narrow (< 30 m) fringing marshes with sandy substrates that are well flushed by tides. These characteristics distinguish living shorelines from the larger meadow marshes in which most of the current knowledge about created marshes was developed. The value of living shorelines for providing both erosion control and habitat for estuarine organisms has been documented but their capacity for carbon sequestration has not. We measured carbon sequestration rates in living shorelines and sandy transplanted Spartina alterniflora marshes in the Newport River Estuary, North Carolina. The marshes sampled here range in age from 12 to 38 years and represent a continuum of soil development. Carbon sequestration rates ranged from 58 to 283 g C m-2 yr-1 and decreased with marsh age. The pattern of lower sequestration rates in older marshes is hypothesized to be the result of a relative enrichment of labile organic matter in younger sites and illustrates the importance of choosing mature marshes for determination of long-term carbon sequestration potential. The data presented here are within the range of published carbon sequestration rates for S. alterniflora marshes and suggest that wide-scale use of the living shoreline approach to shoreline management may come with a substantial carbon benefit.

Exploration of the Canyon-Incised Continental Margin of the Northeastern United States Reveals Dynamic Habitats and Diverse Communities.

Abstract: The continental margin off the northeastern United States (NEUS) contains numerous, topographically complex features that increase habitat heterogeneity across the region. However, the majority of these rugged features have never been surveyed, particularly using direct observations. During summer 2013, 31 Remotely-Operated Vehicle (ROV) dives were conducted from 494 to 3271 m depth across a variety of seafloor features to document communities and to infer geological processes that produced such features. The ROV surveyed six broad-scale habitat features, consisting of shelf-breaching canyons, slope-sourced canyons, inter-canyon areas, open-slope/landslide-scar areas, hydrocarbon seeps, and Mytilus Seamount. Four previously unknown chemosynthetic communities dominated by Bathymodiolus mussels were documented. Seafloor methane hydrate was observed at two seep sites. Multivariate analyses indicated that depth and broad-scale habitat significantly influenced megafaunal coral (58 taxa), demersal fish (69 taxa), and decapod crustacean (34 taxa) assemblages. Species richness of fishes and crustaceans significantly declined with depth, while there was no relationship between coral richness and depth. Turnover in assemblage structure occurred on the middle to lower slope at the approximate boundaries of water masses found previously in the region. Coral species richness was also an important variable explaining variation in fish and crustacean assemblages. Coral diversity may serve as an indicator of habitat suitability and variation in available niche diversity for these taxonomic groups. Our surveys added 24 putative coral species and three fishes to the known regional fauna, including the black coral Telopathes magna, the octocoral Metallogorgia melanotrichos and the fishes Gaidropsarus argentatus, Guttigadus latifrons, and Lepidion guentheri. Marine litter was observed on 81% of the dives, with at least 12 coral colonies entangled in debris. While initial exploration revealed the NEUS region to be both geologically dynamic and biologically diverse, further research into the abiotic conditions and the biotic interactions that influence species abundance and distribution is needed.

Evidence for acoustic communication among bottom foraging humpback whales

Abstract: Humpback whales (Megaptera novaeangliae), a mysticete with a cosmopolitan distribution, demonstrate marked behavioural plasticity. Recent studies show evidence of social learning in the transmission of specific population level traits ranging from complex singing to stereotyped prey capturing behaviour. Humpback whales have been observed to employ group foraging techniques, however details on how individuals coordinate behaviour in these groups is challenging to obtain. This study investigates the role of a novel broadband patterned pulsed sound produced by humpback whales engaged in bottom-feeding behaviours, referred to here as a ‘paired burst’ sound. Data collected from 56 archival acoustic tag deployments were investigated to determine the functional significance of these signals. Paired burst sound production was associated exclusively with bottom feeding under low-light conditions, predominantly with evidence of associated conspecifics nearby suggesting that the sound likely serves either as a communicative signal to conspecifics, a signal to affect prey behaviour, or possibly both. This study provides additional evidence for individual variation and phenotypic plasticity of foraging behaviours in humpback whales and provides important evidence for the use of acoustic signals among foraging individuals in this species.

Nitrogenous Nutrients Promote the Growth and Toxicity of Dinophysis acuminata during Estuarine Bloom Events

Abstract: Diarrhetic Shellfish Poisoning (DSP) is a globally significant human health syndrome most commonly caused by dinoflagellates within the genus Dinophysis. While blooms of harmful algae have frequently been linked to excessive nutrient loading, Dinophysis is a mixotrophic alga whose growth is typically associated with prey availability. Consequently, field studies of Dinophysis and nutrients have been rare. Here, the temporal dynamics of Dinophysis acuminata blooms, DSP toxins, and nutrients (nitrate, ammonium, phosphate, silicate, organic compounds) were examined over four years within two New York estuaries (Meetinghouse Creek and Northport Bay). Further, changes in the abundance and toxicity of D. acuminata were assessed during a series of nutrient amendment experiments performed over a three year period. During the study, Dinophysis acuminata blooms exceeding one million cells L-1 were observed in both estuaries. Highly significant (p<0.001) forward stepwise multivariate regression models of ecosystem observations demonstrated that D. acuminata abundances were positively dependent on multiple environmental parameters including ammonium (p = 0.007) while cellular toxin content was positively dependent on ammonium (p = 0.002) but negatively dependent on nitrate (p<0.001). Nitrogen- (N) and phosphorus- (P) containing inorganic and organic nutrients significantly enhanced D. acuminata densities in nearly all (13 of 14) experiments performed. Ammonium significantly increased cell densities in 10 of 11 experiments, while glutamine significantly enhanced cellular DSP content in 4 of 5 experiments examining this compound. Nutrients may have directly or indirectly enhanced D. acuminata abundances as densities of this mixotroph during experiments were significantly correlated with multiple members of the planktonic community (phytoflagellates and Mesodinium). Collectively, this study demonstrates that nutrient loading and more specifically N-loading promotes the growth and toxicity of D. acuminata populations in coastal zones.

Impacts of climate change on the ecotoxicology of chemical contaminants in estuarine organisms.

Abstract: Global climate change effects will vary geographically, and effects on estuaries should be independently considered. This review of the impacts of climate change on the ecotoxicology of chemical contaminants aims to summarize responses that are specific to estuarine species. Estuarine organisms are uniquely adapted to large fluctuations in temperature, salinity, oxygen, and pH, and yet future changes in climate may make them more susceptible to chemical contaminants. Recent research has hig- hlighted the interactive effects of chemical and nonchemical stressors on chemical uptake, metabolism, and organism survival. Assessments have revealed that the nature of the interaction between climate variables and chemical pollution will depend on es- tuarine species and life stage, duration and timing of exposure, prior stressor exposure, and contaminant class. A need for further research to elucidate mechanisms of toxicity under different abiotic conditions and to incorporate climate change factors into toxicity testing was identified. These efforts will improve environmental risk assessment of chemical contaminants and manage- ment capabilities under changing climate conditions (Current Zoology 61 (4): 641-652, 2015).

Decadal Declines of Mercury in Adult Bluefish (1972-2011) from the Mid-Atlantic Coast of the U.S.A.

Abstract: Concentrations of total mercury were measured in muscle of adult bluefish (Pomatomus saltatrix) collected in 2011 off North Carolina and compared with similar measurements made in 1972. Concentrations of mercury decreased by 43% in the fish between the two time periods, with an average rate of decline of about 10% per decade. This reduction is similar to estimated reductions of mercury observed in atmospheric deposition, riverine input, seawater, freshwater lakes, and freshwater fish across northern North America. Eight other studies between 1973 and 2007 confirm the decrease in mercury levels in bluefish captured in the Mid-Atlantic Bight. These findings imply that (1) reductions in the release of mercury across northern North America were reflected rather quickly (decades) in the decline of mercury in adult bluefish; (2) marine predatory fish may have been contaminated by anthropogenic sources of mercury for over 100 years; and (3) if bluefish are surrogates for other predators in the Mid-Atlantic Bight...

Shoreline Change in the New River Estuary, North Carolina: Rates and Consequences

Abstract: Currin, C.; Davis, J.; Cowart Baron, L.; Malhotra, A., and Fonseca, M., 2015. Shoreline change in the New River Estuary, North Carolina: Rates and consequences. Aerial photography was used to determine rates of shoreline change in the New River Estuary (NRE), North Carolina, from 1956 to 2004. The NRE shoreline was digitized from aerial photographs taken in 1956, 1989, and 2004, and shoreline type was determined by ground-truthing the entire shoreline by small boat in 2009. Major shoreline type categories included swamp forest (6% of total), salt marsh (21%), sediment bank (53%), and modified/hardened (19%). Ground-truthing provided additional details on relief, marsh species composition, and structure type. A point-based, end-point rate approach was used to measure shoreline change rate (SCR) at 50 m intervals for the periods 1956–89, 1989–2004, and 1956–2004. Representative wave energy (RWE) was modeled for each interval using local bathymetry and wind data. Average SCR across all shoreline typ...

Testing marine conservation applications of unmanned aerial systems (UAS) in a remote marine protected area1

Abstract: In 2014, the United States National Oceanic and Atmospheric Administration (NOAA) utilized unique partnerships with the National Aeronautics and Space Administration (NASA), and the US Coast Guard ...

Measuring spatial variation in secondary production and food quality using a common consumer approach in Lake Erie.

Abstract: Lake Erie is a large lake straddling the border of the USA and Canada that has become increasingly eutrophic in recent years. Eutrophication is particularly focused in the shallow western basin. The western basin of Lake Erie is hydrodynamically similar to a large estuary, with riverine inputs from the Detroit and Maumee Rivers mixing together and creating gradients in chemical and physical conditions. This study was driven by two questions: (1) How does secondary production and food quality for consumers vary across this large mixing zone? and (2) Are there correlations between cyanobacterial abundance and secondary production or food quality for consumers? Measuring spatial and temporal variation in secondary production and food quality is difficult for a variety of logistical reasons, so here a common consumer approach was used. In a common consumer approach, individuals of a single species are raised under similar conditions until placed in the field across environmental gradients of interest. After some period of exposure, the response of that common consumer is measured to provide an index of spatial variation in conditions. Here, a freshwater mussel (Lampsilis siliquoidea) was deployed at 32 locations that spanned habitat types and a gradient in cyanobacterial abundance in the western basin of Lake Erie to measure spatial variation in growth (an index of secondary production) and fatty acid (FA) content (an index of food quality). We found secondary production was highest within the Maumee river mouth and lowest in the open waters of the lake. Mussel tissues in the Maumee river mouth also included more eicosapentaenoic and docosapentaenoic fatty acids (EPA and DPA, respectively), but fewer bacterial FAs, suggesting more algae at the base of the food web in the Maumee river mouth compared to open lake sites. The satellite-derived estimate of cyanobacterial abundance was not correlated to secondary production, but was positively related to EPA and DPA content in the mussels, suggesting more of these important FAs in locations with more cyanobacteria. These results suggest that growth of secondary consumers and the availability of important fatty acids in the western basin are centered on the Maumee river mouth.

Phytoplankton bloom phenomena in the North Atlantic Ocean and Arabian Sea

Abstract: John F. Marra1*, Tommy D. Dickey2, Albert J. Plueddemann3, Robert A. Weller3, Christopher S. Kinkade4, and Malgorzata Stramska5 Earth and Environmental Sciences Department, Brooklyn College (CUNY), Brooklyn, NY, USA Ocean Physics Laboratory, University of California Santa Barbara, Santa Barbara, CA, USA Physical Oceanography Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA NOAA National Ocean Service, Silver Spring, MD 20910, USA Institute of Oceanology of the Polish Academy of Sciences, Sopot 81-712, Poland *Corresponding author: tel: +1 718 951 5000x2594; fax: +1 718 951 4753; e-mail: jfm7780@brooklyn.cuny.edu

Growth performance, survival and body composition of southern flounder Paralichthys lethostigma larvae fed different formulated microdiets

Abstract: Three experiments were conducted to evaluate the effects of micro-bound diets (MBD) on southern flounder larvae. In experiment 1, four MBDs were formulated with different protein sources as follows: MBD 1: herring meal, MBD 2: menhaden meal, MBD 3: menhaden and squid meal; MBD 4: menhaden, squid and herring meal. In experiment 2, four MBDs were formulated as follows: MBD 5: menhaden, squid and herring meal; MBD 6: menhaden, squid, herring and attractants; MBD 7: menhaden, squid, herring and casein, and MBD 8: menhaden, squid, herring, casein and attractants. In experiment 3, three groups were maintained as follows: Group 1: live feed; Group 2: co-fed with MBD 6; and Group 3: MBD 6. In experiment 1 on 35 dph, survival and body weight (BW) of the fish fed MBD 4 was significantly higher than the MBDs 1 and 2. In experiment 2 on 34 dph, fish fed MBD 6 had significantly higher BW than the commercial microdiets. In experiment 3 on 21 dph, fish receiving only MBD had significantly lower survival than the other groups. Growth, survival and larval fatty acid composition suggested that co-feeding MBD 6, a mixture of marine protein sources plus attractants was more effective than the other MBDs.

Antibiotic Efficacy in Eliminating Leptospiruria in California Sea Lions (Zalophus californianus) Stranding with Leptospirosis.

Abstract: Stranded California sea lions (Zalophus californianus) along the California coast have been diagnosed with leptospirosis every year since at least the 1980s. Between September 2010 and November 2011, we followed 14 stranded California sea lions that survived to release and evaluated antibiotic efficacy in eliminating leptospiruria (urinary shedding of leptospires). Leptospiruria was assessed by real-time PCR of urine and urine culture, with persistence assessed using longitudinally collected samples. Serum chemistry was used to assess recovery of normal renal function. Microscopic agglutination testing (MAT) was performed to assess serum anti-Leptospira antibody titers, and the MAT reactivity patterns were consistent with L. interrogans serovar Pomona infection frequently observed in this population. Animals were initially treated for 6 to 16 d (median = 10.5; mean = 10.8) with antibiotics from the penicillin family, with some receiving additional antibiotics to treat other medical conditions. All urine cultures were negative; therefore, the presence of leptospiruria was assessed using PCR. Leptospiruria continued beyond the initial course of penicillin family antibiotics in 13 of the 14 sea lions, beyond the last antibiotic dose in 11 of the 14 sea lions, beyond recovery of renal function in 13 of the 14 sea lions, and persisted for at least 8 to 86 d (median = 45; mean = 46.8). Five animals were released with no negative urine PCR results detected; thus, their total shedding duration may have been longer. Cessation of leptospiruria was more likely in animals that received antibiotics for a greater duration, especially if coverage was uninterrupted. Real-time PCR results indicate that an antibiotic protocol commonly used to treat leptospirosis in rehabilitating California sea lions does not eliminate leptospiruria. It is possible that antibiotic protocols given for a longer duration and/or including other antibiotics may be effective in eliminating leptospiruria. These results may have important human and animal health implications, especially in rehabilitation facilities, as Leptospira transmission may occur through contact with animals with persistent leptospiruria.

The Importance of Federal and Regional Partnerships in Coastal Observing

Abstract: Congress designed the U.S. Integrated Ocean Observing System (IOOS) as a partnership of 17 Federal agencies and 11 regional systems. Through collaborative projects and shared objectives, these partnerships improve the understanding of the coastal ocean environment by increasing the data available for modeling and analysis, improving forecasting capabilities, and through new decision support tool innovations. This chapter describes the benefits of IOOS partnerships and highlights five case studies. The case studies focus on enhancements to fisheries management, drinking water management, prediction of harmful algal blooms, and the benefits of a dedicated coastal ocean modeling testbed that intentionally brings together the research and operational communities.

Infrastructure and tools for serving, accessing, and analyzing ocean information from the Integrated Ocean Observing System

Abstract: According to the Integrated Coastal Ocean Observation System (ICOOS) Act of 2009 the U.S. Integrated Ocean Observing System (IOOS®) Enterprise extends across 17 federal agencies and 11 regional associations and includes numerous actors from within those organizations. One of the primary functions IOOS provides is a Data Management and Communications (DMAC) Subsystem that aims to make discoverable and accessible data and information from multiple disciplines across the aforementioned enterprise. With such diverse participation and broad mandate for the types of data included in IOOS, it is unrealistic to expect that a single data center is capable of aggregating, managing, curating, and distributing all of the ocean data of interest to the IOOS enterprise. Instead, the IOOS enterprise implements a distributed data network bound together by a few key features of a shared vision for data discovery and access. This paper will discuss progress and lessons learned from nearly ten years of experience in creating or adapting the standards, tools, and community needed to develop and maintain the distributed data network that will support IOOS efforts in science, operational decision making, and product delivery. The current configuration of the DMAC subsystem of IOOS is a combination of people, process, and technology that provide a service to the nation. The primary service DMAC provides is to deliver well curated and documented ocean data and information to the public using the World Wide Web as the primary platform. Within these three areas (people, process, and technology) choices are made based on resources, policy mandates, available skills, technical maturity and capability, and customer requirements. Collectively the choices within each area determine the architecture of the DMAC system and will form the organization for this paper. The “people” form the main stakeholder groups of IOOS, both the builders and the users, so understanding how these various stakeholder groups work cooperatively to grow the DMAC system is critical to progress. The “process” area determines how the people work together and the policy constraints the system is under. Finally, the “technology” includes the software and standards DMAC implements to address the system needs.