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Open AccessJournal ArticleDOI

A Machine Learning Prediction Model of Respiratory Failure Within 48 Hours of Patient Admission for COVID-19: Model Development and Validation.

TLDR
In this paper, a machine learning model was used to predict respiratory failure within 48 hours of admission based on data from the emergency department of patients with COVID-19 who were admitted to Northwell Health acute care hospitals.
Abstract
Background: Predicting early respiratory failure due to COVID-19 can help triage patients to higher levels of care, allocate scarce resources, and reduce morbidity and mortality by appropriately monitoring and treating the patients at greatest risk for deterioration. Given the complexity of COVID-19, machine learning approaches may support clinical decision making for patients with this disease. Objective: Our objective is to derive a machine learning model that predicts respiratory failure within 48 hours of admission based on data from the emergency department. Methods: Data were collected from patients with COVID-19 who were admitted to Northwell Health acute care hospitals and were discharged, died, or spent a minimum of 48 hours in the hospital between March 1 and May 11, 2020. Of 11,525 patients, 933 (8.1%) were placed on invasive mechanical ventilation within 48 hours of admission. Variables used by the models included clinical and laboratory data commonly collected in the emergency department. We trained and validated three predictive models (two based on XGBoost and one that used logistic regression) using cross-hospital validation. We compared model performance among all three models as well as an established early warning score (Modified Early Warning Score) using receiver operating characteristic curves, precision-recall curves, and other metrics. Results: The XGBoost model had the highest mean accuracy (0.919; area under the curve=0.77), outperforming the other two models as well as the Modified Early Warning Score. Important predictor variables included the type of oxygen delivery used in the emergency department, patient age, Emergency Severity Index level, respiratory rate, serum lactate, and demographic characteristics. Conclusions: The XGBoost model had high predictive accuracy, outperforming other early warning scores. The clinical plausibility and predictive ability of XGBoost suggest that the model could be used to predict 48-hour respiratory failure in admitted patients with COVID-19.

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Comparing machine learning algorithms for predicting ICU admission and mortality in COVID-19.

TL;DR: In this paper, the authors compared the performance of 18 machine learning algorithms for predicting ICU admission and mortality among COVID-19 patients and showed that ensemble-based models performed better than other model types at predicting both 5-day ICU admissions and 28-day mortality from COVID19.
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Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction

TL;DR: In this article, the authors proposed a machine learning (ML) method based on blood tests data to predict COVID-19 mortality risk using a powerful combination of five features: neutrophils, lymphocytes, lactate dehydrogenase (LDH), high-sensitivity C-reactive protein (hs-CRP), and age.
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Potential applications and performance of machine learning techniques and algorithms in clinical practice: A systematic review

TL;DR: In this article , a systematic review examines the performance of machine learning algorithms and evaluates the progress made to date towards their implementation in clinical practice, concluding that the XGBoost (extreme gradient boosting) algorithm showed the highest potential for clinical applications.
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Diagnosis and prediction of COVID-19 severity: can biochemical tests and machine learning be used as prognostic indicators?

TL;DR: In this article, the authors used Artificial Neural Networks (ANN), decision trees (DT), partial least squares discriminant analysis (PLS-DA), and K nearest neighbor algorithm (KNN) models to predict positive and negative patients with COVID-19.
References
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Proceedings ArticleDOI

XGBoost: A Scalable Tree Boosting System

TL;DR: XGBoost as discussed by the authors proposes a sparsity-aware algorithm for sparse data and weighted quantile sketch for approximate tree learning to achieve state-of-the-art results on many machine learning challenges.
Journal ArticleDOI

Clinical predictors of mortality due to COVID-19 based on an analysis of data of 150 patients from Wuhan, China.

TL;DR: This study conducted a retrospective multicenter study of 68 death cases and 82 discharged cases with laboratory-confirmed infection of SARS-CoV-2 and confirmed that some patients died of fulminant myocarditis, which is characterized by a rapid progress and a severe state of illness.
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Missing value estimation methods for DNA microarrays.

TL;DR: It is shown that KNNimpute appears to provide a more robust and sensitive method for missing value estimation than SVDimpute, and both SVD Impute and KNN Impute surpass the commonly used row average method (as well as filling missing values with zeros).
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A study of the behavior of several methods for balancing machine learning training data

TL;DR: This work performs a broad experimental evaluation involving ten methods, three of them proposed by the authors, to deal with the class imbalance problem in thirteen UCI data sets, and shows that, in general, over-sampling methods provide more accurate results than under-sampled methods considering the area under the ROC curve (AUC).
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