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Open AccessJournal ArticleDOI

Bias between MNI and Talairach coordinates analyzed using the ICBM-152 brain template

TLDR
An MNI‐to‐Talairach (MTT) transform to correct for bias between MNI and Talairach coordinates was formulated using a best‐fit analysis in one hundred high‐resolution 3‐D MR brain images.
Abstract
MNI coordinates determined using SPM2 and FSL/FLIRT with the ICBM-152 template were compared to Talairach coordinates determined using a landmark-based Talairach registration method (TAL). Analysis revealed a clear-cut bias in reference frames (origin, orientation) and scaling (brain size). Accordingly, ICBM-152 fitted brains were consistently larger, oriented more nose down, and translated slightly down relative to TAL fitted brains. Whole brain analysis of MNI/Talairach coordi- nate disparity revealed an ellipsoidal pattern with disparity ranging from zero at a point deep within the left hemisphere to greater than 1-cm for some anterior brain areas. MNI/Talairach coordinate dis- parity was generally less for brains fitted using FSL. The mni2tal transform generally reduced MNI/ Talairach coordinate disparity for inferior brain areas but increased disparity for anterior, posterior, and superior areas. Coordinate disparity patterns differed for brain templates (MNI-305, ICBM-152) using the same fitting method (FSL/FLIRT) and for different fitting methods (SPM2, FSL/FLIRT) using the same template (ICBM-152). An MNI-to-Talairach (MTT) transform to correct for bias between MNI and Talairach coordinates was formulated using a best-fit analysis in one hundred high-resolution 3-D MR brain images. MTT transforms optimized for SPM2 and FSL were shown to reduced group mean MNI/Talairach coordinate disparity from a 5-13 mm to 1-2 mm for both deep and superficial brain sites. MTT transforms provide a validated means to convert MNI coordinates to Talairach compatible coordinates for studies using either SPM2 or FSL/FLIRT with the ICBM-152 template. Hum Brain Mapp

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The organization of the human cerebral cortex estimated by intrinsic functional connectivity

TL;DR: In this paper, the organization of networks in the human cerebrum was explored using resting-state functional connectivity MRI data from 1,000 subjects and a clustering approach was employed to identify and replicate networks of functionally coupled regions across the cerebral cortex.
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Where Is the Semantic System? A Critical Review and Meta-Analysis of 120 Functional Neuroimaging Studies

TL;DR: In this article, the authors analyzed 120 functional neuroimaging studies focusing on semantic processing and identified reliable areas of activation in these studies using the activation likelihood estimate (ALE) technique, which formed a distinct, left-lateralized network comprised of 7 regions: posterior inferior parietal lobe, middle temporal gyrus, fusiform and parahippocampal gyri, dorsomedial prefrontal cortex, inferior frontal gyrus and posterior cingulate gyrus.
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Large-scale automated synthesis of human functional neuroimaging data

TL;DR: An automated brain-mapping framework that uses text-mining, meta-analysis and machine-learning techniques to generate a large database of mappings between neural and cognitive states is described and validated.
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Functional topography in the human cerebellum: a meta-analysis of neuroimaging studies

TL;DR: An activation likelihood estimate (ALE) meta-analysis of neuroimaging studies reporting cerebellar activation in selected task categories provided support for an anterior sensorimotor vs. posterior cognitive/emotional dichotomy in the human cerebellum.
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The integration of negative affect, pain and cognitive control in the cingulate cortex

TL;DR: It is demonstrated that negative affect, pain and cognitive control activate an overlapping region of the dorsal cingulate — the anterior midcingulate cortex (aMCC), which constitutes a hub where information about reinforcers can be linked to motor centres responsible for expressing affect and executing goal-directed behaviour.
References
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Book

Co-planar stereotaxic atlas of the human brain : 3-dimensional proportional system : an approach to cerebral imaging

TL;DR: Direct and Indirect Radiologic Localization Reference System: Basal Brain Line CA-CP Cerebral Structures in Three-Dimensional Space Practical Examples for the Use of the Atlas in Neuroradiologic Examinations Three- Dimensional Atlas of a Human Brain Nomenclature-Abbreviations Anatomic Index Conclusions.
Journal ArticleDOI

A Generalized inverse for matrices

TL;DR: A generalization of the inverse of a non-singular matrix is described in this paper as the unique solution of a certain set of equations, which is used here for solving linear matrix equations, and for finding an expression for the principal idempotent elements of a matrix.
Journal ArticleDOI

Spatial registration and normalization of images

TL;DR: A general technique that facilitates nonlinear spatial (stereotactic) normalization and image realignment is presented that minimizes the sum of squares between two images following non linear spatial deformations and transformations of the voxel (intensity) values.
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