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Open AccessJournal ArticleDOI

Dynamic cell contacts between periportal mesenchyme and ductal epithelium act as a rheostat for liver cell proliferation.

TLDR
In this article, using organoid co-cultures that recapitulate the ductal-to-mesenchymal cell architecture of the portal tract, the authors demonstrate that a subpopulation of mouse periportal mesenchymythropoietin cells exerts dual control on proliferation of the epithelium.
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This article is published in Cell Stem Cell.The article was published on 2021-11-04 and is currently open access. It has received 28 citations till now. The article focuses on the topics: Liver cell & Ductal cells.

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Notch signaling pathway: architecture, disease, and therapeutics

TL;DR: In this article , a review of the history, architecture, regulatory mechanisms, contributions to physiological development, related diseases, and therapeutic applications of the NOTCH pathway is presented. But, the authors emphasize that the outcomes of NOTCH signaling are changeable and highly dependent on context.
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Organoids

TL;DR: Zhao et al. as discussed by the authors discussed the rationale underlying the selection and development of these materials and methods to control the cellular/tissue niche; and therefore, the structure and function of the engineered organoid.
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Understanding the cellular interactome of non-alcoholic fatty liver disease

TL;DR: In this article , the authors describe how rapidly evolving technologies such as singlecell genomics, spatial transcriptomics and single-cell ligand-receptor analyses are transforming our understanding of the cellular interactome in NASH and how this new, high-resolution information is being leveraged to develop rational new therapies for patients with NASH.
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The sirtuin family in health and disease

TL;DR: The SIRT protein family plays a variety of important roles in cellular biology such as inflammation, metabolism, oxidative stress, and apoptosis, and is considered a potential therapeutic target for different kinds of pathologies including cancer, cardiovascular disease, respiratory disease, and other conditions as mentioned in this paper .
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Liver regeneration: Cellular origin and molecular mechanisms

TL;DR: In this review, the recent studies on cell origin of newly generated hepatocytes and the underlying mechanisms of liver regeneration in homeostasis and liver injury are summarized.
References
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NIH Image to ImageJ: 25 years of image analysis

TL;DR: The origins, challenges and solutions of NIH Image and ImageJ software are discussed, and how their history can serve to advise and inform other software projects.
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Fiji: an open-source platform for biological-image analysis

TL;DR: Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis that facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system.
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A new method for gray-level picture thresholding using the entropy of the histogram

TL;DR: Two methods of entropic thresholding proposed by Pun (Signal Process.,2, 1980, 223–237;Comput.16, 1981, 210–239) have been carefully and critically examined and a new method with a sound theoretical foundation is proposed.
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Full-length RNA-seq from single cells using Smart-seq2

TL;DR: In this article, the authors presented a detailed protocol for Smart-seq2 that allows the generation of full-length cDNA and sequencing libraries by using standard reagents, and the entire protocol takes ∼2 d from cell picking to having a final library ready for sequencing; sequencing will require an additional 1-3 d depending on the strategy and sequencer.
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