Multi-contrast human neonatal brain atlas: application to normal neonate development analysis.
Kenichi Oishi,Susumu Mori,Susumu Mori,Pamela Donohue,Thomas Ernst,Lynn Anderson,Steven Buchthal,Andreia V. Faria,Hangyi Jiang,Hangyi Jiang,Xin Li,Michael I. Miller,Peter C.M. van Zijl,Peter C.M. van Zijl,Linda Chang +14 more
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TLDR
The development of neonatal brain atlases with detailed anatomic information derived from DTI and co-registered anatomical MRI and a diffeomorphic transformation is reported, which was able to normalize Neonatal brain images to the atlas space and three-dimensionally parcellate images into 122 regions.About:
This article is published in NeuroImage.The article was published on 2011-05-01 and is currently open access. It has received 287 citations till now. The article focuses on the topics: Diffusion MRI.read more
Citations
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Journal ArticleDOI
A Multi-Atlas Label Fusion Tool for Neonatal Brain MRI Parcellation and Quantification.
Yoshihisa Otsuka,Yoshihisa Otsuka,Linda Chang,Linda Chang,Yukako Kawasaki,Yukako Kawasaki,Dan Wu,Dan Wu,Can Ceritoglu,Kumiko Oishi,Thomas Ernst,Thomas Ernst,Michael I. Miller,Susumu Mori,Susumu Mori,Kenichi Oishi +15 more
TL;DR: A T1‐weighted, neonatal, multi‐atlas repository is developed and integrated into the MALF‐based brain segmentation tools in the cloud‐based platform, MRICloud.org, which will make the latest MALf tools readily available to users, with minimum barriers, and will expedite and accelerate advancements in developmental neuroscience research, neonatology, and pediatric neuroradiology.
Journal ArticleDOI
Delayed early developmental trajectories of white matter tracts of functional pathways in preterm-born infants: Longitudinal diffusion tensor imaging data
Linda Chang,Kentaro Akazawa,Robyn Yamakawa,Sara Hayama,Steven Buchthal,Daniel Alicata,Tamara Andres,Deborrah Castillo,Kumiko Oishi,Jon Skranes,Thomas Ernst,Kenichi Oishi +11 more
TL;DR: Probabilistic maps of white matter pathways related to motor, somatosensory, auditory, visual, and limbic functions, and major white matter tracts were applied to evaluate the developmental trajectories of these tracts, using longitudinal diffusion tensor imaging (DTI) obtained in term-born and preterm-born healthy infants.
Journal ArticleDOI
A Neonatal Bimodal MR-CT Head Template
Sona Ghadimi,Sona Ghadimi,Mehrana Mohtasebi,Hamid Abrishami Moghaddam,Hamid Abrishami Moghaddam,Reinhard Grebe,Masoumeh Gity,Fabrice Wallois,Fabrice Wallois +8 more
TL;DR: This paper presents, for the first time, an approach to create a fully registered bimodal MR-CT head template for neonates with a gestational age of 39 to 42 weeks and demonstrates the superiority of the proposed method for the creation of CT template in the standard space provided by MR neonatal head template.
Journal ArticleDOI
Construction and validation of a database of head models for functional imaging of the neonatal brain.
Liam H. Collins-Jones,Tomoki Arichi,Tanya Poppe,Addison Billing,Jiaxin Xiao,Lorenzo Fabrizi,Sabrina Brigadoi,Jeremy C. Hebden,Clare E. Elwell,Robert J. Cooper +9 more
TL;DR: The construction of a database of individual structural priors of the neonatal head using 215 individual‐level datasets at ages 29–44 weeks postmenstrual age from the Developing Human Connectome Project is described and a method to segment the extra‐cerebral tissue against manual segmentation is validated.
Book ChapterDOI
Atlas construction via dictionary learning and group sparsity
TL;DR: Experimental results demonstrate that the proposed patch-based sparse representation method can enhance the quality of built atlas by discovering more anatomical details especially in cortical regions, and perform better in a neonatal data normalization application, compared to other existing start-of-the-art nonlinear neonatal brain atlases.
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