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On-Site Detection of SARS-CoV-2 Antigen by Deep Learning-Based Surface-Enhanced Raman Spectroscopy and Its Biochemical Foundations.

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TLDR
In this article, a deep learning-based surface-enhanced Raman spectroscopy technique was developed for the sensitive, rapid, and on-site detection of the SARS-CoV-2 antigen in the throat swabs or sputum from 30 confirmed COVID-19 patients.
Abstract
A rapid, on-site, and accurate SARS-CoV-2 detection method is crucial for the prevention and control of the COVID-19 epidemic. However, such an ideal screening technology has not yet been developed for the diagnosis of SARS-CoV-2. Here, we have developed a deep learning-based surface-enhanced Raman spectroscopy technique for the sensitive, rapid, and on-site detection of the SARS-CoV-2 antigen in the throat swabs or sputum from 30 confirmed COVID-19 patients. A Raman database based on the spike protein of SARS-CoV-2 was established from experiments and theoretical calculations. The corresponding biochemical foundation for this method is also discussed. The deep learning model could predict the SARS-CoV-2 antigen with an identification accuracy of 87.7%. These results suggested that this method has great potential for the diagnosis, monitoring, and control of SARS-CoV-2 worldwide.

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Journal ArticleDOI

Label-Free Spectroscopic SARS-CoV-2 Detection on Versatile Nanoimprinted Substrates

TL;DR: A large-area and label-free testing platform that combines surface-enhanced Raman spectroscopy and machine learning for the rapid and accurate detection of SARS-CoV-2, and envision that it will offer an important tool for virus detection and future outbreak preparedness.
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Surface-enhanced Raman scattering-based immunoassay for severe acute respiratory syndrome coronavirus 2

TL;DR: A surface-enhanced Raman scattering (SERS)-based immunoassay involving an antibody pair, SERS-active hollow Au nanoparticles (NPs), and magnetic beads for the detection of SARS-CoV-2 was presented in this article .
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Performance of Antigen Detection Tests for SARS-CoV-2: A Systematic Review and Meta-Analysis

TL;DR: LFIA tests, though with moderate sensitivity, appear as the most attractive method for use in POCs and for performing seroprevalence studies, and rapid ATs show higher sensitivity in symptomatic patients compared to asymptomatic patients.
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Probing the mutation independent interaction of DNA probes with SARS-CoV-2 variants through a combination of surface-enhanced Raman scattering and machine learning

TL;DR: In this article , a set of DNA probes targeting a specific segment of the nucleocapsid phosphoprotein (N) gene of SARS-CoV-2 with high binding efficiency was developed.
Journal ArticleDOI

High-sensitivity and point-of-care detection of SARS-CoV-2 from nasal and throat swabs by magnetic SERS biosensor

TL;DR: In this article , a point-of-care detection method based on magnetic SERS biosensor composed of Fe3O4-Au nanocomposite and Au nanoneedles array was developed to detect SARS-CoV-2 directly.
References
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Journal ArticleDOI

Structural basis for potent neutralization of SARS-CoV-2 and role of antibody affinity maturation.

TL;DR: The X-ray crystal structure of a potent neutralizing monoclonal antibody, CV30, isolated from a patient infected with SARS-CoV-2, reveals that CV30 binds to an epitope that overlaps with the human ACE2 receptor binding motif providing a structural basis for its neutralization.
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High-Resolution Distance Dependence Study of Surface-Enhanced Raman Scattering Enabled by Atomic Layer Deposition.

TL;DR: The long-range SERS distance dependence should make it possible to detect chemisorbed surface species located as far as ∼3 nm from the AgFON substrate and will provide new insight into the surface chemistry of ALD and catalytic reactions.
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Detection of Hepatitis B virus antigen from human blood: SERS immunoassay in a microfluidic system.

TL;DR: Experimental results indicate that this SERS-active substrate with its strong surface-enhancement factor, high stability and reproducibility plays a crucial role in improving the efficiency of SERS immunoassay.
Journal ArticleDOI

Rapid identification of pathogenic bacteria using Raman spectroscopy and deep learning.

TL;DR: In this article, an extensive dataset of bacterial Raman spectra and apply deep learning approaches to accurately identify 30 common bacterial pathogens, achieving average isolate-level accuracies exceeding 82% and antibiotic treatment identification accuracies of 97.0±0.3%.
Journal ArticleDOI

Raman Spectroscopy-Based Sensitive and Specific Detection of Glycated Hemoglobin

TL;DR: The potential of Raman spectroscopy as a novel analytical method for quantitative detection of HbA1c, without using external dyes or reagents is proposed and demonstrated, and the excellent accuracy and reproducibility achieved in this proof-of-concept study is demonstrated.
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