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Journal ArticleDOI

Species adaptation in a protein molecule.

M F Perutz
- 01 Dec 1983 - 
- Vol. 1, Iss: 1, pp 1-28
TLDR
The results indicate that the tertiary and quaternary structures of deoxy- and oxyhemoglobin have remained almost invariant during vertebrate evolution and that most of the amino acid replacements between species are functionally neutral.
Abstract
The allosteric properties of hemoglobins, especially their responses to ligands other than oxygen, vary widely in different classes of vertebrates. Knowing the stereochemistry of the cooperative effects in human hemoglobin, one can infer the stereochemical basis of these variations from the changes in amino acid sequence. The results indicate that the tertiary and quaternary structures of deoxy- and oxyhemoglobin have remained almost invariant during vertebrate evolution and that most of the amino acid replacements between species are functionally neutral. Adaptations leading to responses to new chemical stimuli have evolved by only a few (one to five) amino acid substitutions in key positions. Once such a response has become superfluous, it may be inactivated, not necessarily by a reversal of one of the original substitutions but by any other that happens to inhibit it.

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Citations
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Journal ArticleDOI

Prediction of protein function from protein sequence and structure.

TL;DR: The state of the art in function prediction is reviewed and some of the underlying difficulties and successes are described, including inferring conservation patterns in members of a functionally uncharacterized family for which many sequences and structures are known.
Journal ArticleDOI

The locus of evolution: evo devo and the genetics of adaptation

TL;DR: There is no theoretical or empirical basis for the evo devo contention that adaptations involving morphology evolve by genetic mechanisms different from those involving physiology and other traits, and substantial data on the genetic basis of adaptation from both genome-wide surveys and single-locus studies are examined.
Journal ArticleDOI

The Loci of Evolution: How Predictable is Genetic Evolution?

TL;DR: Test the empirical support for the cis-regulatory hypothesis with a comprehensive survey of mutations responsible for phenotypic evolution in multicellular organisms and describes and critique the arguments that have been proposed in support of this hypothesis.
Journal ArticleDOI

Positive Darwinian selection after gene duplication in primate ribonuclease genes

TL;DR: In this paper, it was shown that the rate of nonsynonymous nucleotide substitution was significantly higher than that of synonymous substitution for the eosinophil cationic protein (ECP) gene, which strongly suggests that positive Darwinian selection operated in the early stage of evolution of the ECP gene.
Journal ArticleDOI

The genetic causes of convergent evolution.

TL;DR: Evidence for parallel and collateral evolution has been found in many taxa, and an emerging hypothesis is that they result from the fact that mutations in some genetic targets minimize pleiotropic effects while simultaneously maximizing adaptation.
References
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Book

The Neutral Theory of Molecular Evolution

Motoo Kimura
TL;DR: The neutral theory as discussed by the authors states that the great majority of evolutionary changes at the molecular level are caused not by Darwinian selection but by random drift of selectively neutral mutants, which has caused controversy ever since.
Book ChapterDOI

Some factors in the interpretation of protein denaturation.

TL;DR: The chapter reviews that the denaturation is a process in which the spatial arrangement of the polypeptide chains within the molecule is changed from that typical of the native protein to a more disordered arrangement.

The neutral theory of molecular evolution.

Motoo Kimura
TL;DR: The neutral theory as mentioned in this paper states that the great majority of evolutionary changes at the molecular level are caused not by Darwinian selection but by random drift of selectively neutral mutants, which has caused controversy ever since.
Journal ArticleDOI

Non-Darwinian Evolution

Jack Lester King, +1 more
- 16 May 1969 - 
TL;DR: NonDarwinian evolution of protein and DNA, comparing expectations of evolution models for protein and amino acid changes is compared.