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Structural insight into the role of the Ton complex in energy transduction

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TLDR
Electrophysiology studies show that the Ton subcomplex forms pH-sensitive cation-selective channels and provide insight into the mechanism by which it may harness the proton motive force to produce energy.
Abstract
In Gram-negative bacteria, outer membrane transporters import nutrients by coupling to an inner membrane protein complex called the Ton complex. The Ton complex consists of TonB, ExbB, and ExbD, and uses the proton motive force at the inner membrane to transduce energy to the outer membrane via TonB. Here, we structurally characterize the Ton complex from Escherichia coli using X-ray crystallography, electron microscopy, double electron-electron resonance (DEER) spectroscopy, and crosslinking. Our results reveal a stoichiometry consisting of a pentamer of ExbB, a dimer of ExbD, and at least one TonB. Electrophysiology studies show that the Ton subcomplex forms pH-sensitive cation-selective channels and provide insight into the mechanism by which it may harness the proton motive force to produce energy.

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Journal ArticleDOI

Structural basis for nutrient acquisition by dominant members of the human gut microbiota.

TL;DR: X-ray crystal structures of two functionally distinct SusCD complexes purified from Bacteroides thetaiotaomicron are presented and a general model for substrate translocation is derived to provide mechanistic insights into outer membrane nutrient import by members of the microbiota, an area of major importance for understanding human–microbiota symbiosis.
Journal ArticleDOI

Protein assemblies ejected directly from native membranes yield complexes for mass spectrometry

TL;DR: In this article, the authors identified chaperone-porin association and lipid interactions in the β-barrel assembly machinery from Escherichia coli outer membranes, and from inner membranes they identified a pentameric pore of TonB, as well as the proteinconducting channel SecYEG in association with F 1 F O adenosine triphosphate (ATP) synthase.
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Structure and Function of Stator Units of the Bacterial Flagellar Motor

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Structures of the stator complex that drives rotation of the bacterial flagellum.

TL;DR: Comparison to structures of other ion-driven motors indicates that this A 5 B 2 architecture is fundamental to bacterial systems that couple energy from ion flow to generate mechanical work at a distance and suggests that such events involve rotation in the motor structures.
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The contribution of modern EPR to structural biology.

TL;DR: Electron paramagnetic resonance (EPR) spectroscopy combined with site-directed spin labelling is applicable to biomolecules and their complexes irrespective of system size and in a broad range of environments.
References
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TL;DR: The origins, challenges and solutions of NIH Image and ImageJ software are discussed, and how their history can serve to advise and inform other software projects.
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UCSF Chimera--a visualization system for exploratory research and analysis.

TL;DR: Two unusual extensions are presented: Multiscale, which adds the ability to visualize large‐scale molecular assemblies such as viral coats, and Collaboratory, which allows researchers to share a Chimera session interactively despite being at separate locales.
Book ChapterDOI

Processing of X-ray diffraction data collected in oscillation mode

TL;DR: The methods presented in the chapter have been applied to solve a large variety of problems, from inorganic molecules with 5 A unit cell to rotavirus of 700 A diameters crystallized in 700 × 1000 × 1400 A cell.
Journal ArticleDOI

Phaser crystallographic software

TL;DR: A description is given of Phaser-2.1: software for phasing macromolecular crystal structures by molecular replacement and single-wavelength anomalous dispersion phasing.
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