E
Emmanuel Caruyer
Researcher at University of Rennes
Publications - 54
Citations - 2114
Emmanuel Caruyer is an academic researcher from University of Rennes. The author has contributed to research in topics: Diffusion MRI & Tractography. The author has an hindex of 14, co-authored 51 publications receiving 1702 citations. Previous affiliations of Emmanuel Caruyer include University of Pennsylvania & École Normale Supérieure.
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Journal ArticleDOI
The challenge of mapping the human connectome based on diffusion tractography
Klaus H. Maier-Hein,Peter F. Neher,Jean-Christophe Houde,Marc-Alexandre Côté,Eleftherios Garyfallidis,Jidan Zhong,Maxime Chamberland,Fang-Cheng Yeh,Ying-Chia Lin,Qing Ji,Wilburn E. Reddick,John O. Glass,David Qixiang Chen,Yuanjing Feng,Chengfeng Gao,Ye Wu,Jieyan Ma,H Renjie,Qiang Li,Carl-Fredrik Westin,Samuel Deslauriers-Gauthier,J. Omar Ocegueda Gonzalez,Michael Paquette,Samuel St-Jean,Gabriel Girard,François Rheault,Jasmeen Sidhu,Chantal M. W. Tax,Fenghua Guo,Hamed Y. Mesri,Szabolcs David,Martijn Froeling,Anneriet M. Heemskerk,Alexander Leemans,Arnaud Boré,Basile Pinsard,Christophe Bedetti,Matthieu Desrosiers,Simona M. Brambati,Julien Doyon,Alessia Sarica,Roberta Vasta,Antonio Cerasa,Aldo Quattrone,Jason D. Yeatman,Ali R. Khan,Wes Hodges,Simon Alexander,David Romascano,Muhamed Barakovic,Anna Auría,Oscar Esteban,Alia Lemkaddem,Jean-Philippe Thiran,Hasan Ertan Cetingul,Benjamin L. Odry,Boris Mailhe,Mariappan S. Nadar,Fabrizio Pizzagalli,Gautam Prasad,Julio E. Villalon-Reina,Justin Galvis,Paul M. Thompson,Francisco De Santiago Requejo,Pedro Luque Laguna,Luis Miguel Lacerda,Rachel Barrett,Flavio Dell'Acqua,Marco Catani,Laurent Petit,Emmanuel Caruyer,Alessandro Daducci,Tim B. Dyrby,Tim Holland-Letz,Claus C. Hilgetag,Bram Stieltjes,Maxime Descoteaux +76 more
TL;DR: The encouraging finding that most state-of-the-art algorithms produce tractograms containing 90% of the ground truth bundles (to at least some extent) is reported, however, the same tractograms contain many more invalid than valid bundles, and half of these invalid bundles occur systematically across research groups.
Journal ArticleDOI
Design of multishell sampling schemes with uniform coverage in diffusion MRI
TL;DR: In diffusion MRI, a technique known as diffusion spectrum imaging reconstructs the propagator with a discrete Fourier transform, from a Cartesian sampling of the diffusion signal, providing high angular resolution diffusion imaging.
Journal ArticleDOI
Quantitative Comparison of Reconstruction Methods for Intra-Voxel Fiber Recovery From Diffusion MRI
Alessandro Daducci,Erick J. Canales-Rodríguez,Maxime Descoteaux,Eleftherios Garyfallidis,Yaniv Gur,Ying-Chia Lin,Merry Mani,Sylvain Merlet,Michael Paquette,Alonso Ramirez-Manzanares,Marco Reisert,Paulo Rodrigues,Farshid Sepehrband,Emmanuel Caruyer,Jeiran Choupan,Rachid Deriche,Mathews Jacob,Gloria Menegaz,V. Prckovska,Mariano Rivera,Yves Wiaux,Jean-Philippe Thiran +21 more
TL;DR: Evaluated methods encompass a mixture of classical techniques well known in the literature such as diffusion tensor, Q-Ball and diffusion spectrum imaging, algorithms inspired by the recent theory of compressed sensing and also brand new approaches proposed for the first time at this contest.
Journal ArticleDOI
MAPL: Tissue microstructure estimation using Laplacian-regularized MAP-MRI and its application to HCP data
TL;DR: The potential of using a well-regularized functional basis together with multi-compartment approaches to recover important microst structure tissue parameters with much less variability is illustrated, thus contributing to the challenge of better understanding microstructure-related features of the brain's white matter.
Posted ContentDOI
Tractography-based connectomes are dominated by false-positive connections
Klaus H. Maier-Hein,Peter F. Neher,Jean-Christophe Houde,Marc-Alexandre Côté,Eleftherios Garyfallidis,Jidan Zhong,Maxime Chamberland,Fang-Cheng Yeh,Ying-Chia Lin,Qing Ji,Wilburn E. Reddick,John O. Glass,David Qixiang Chen,Yuanjing Feng,Chengfeng Gao,Ye Wu,Jieyan Ma,H Renjie,Qiang Li,Carl-Fredrik Westin,Samuel Deslauriers-Gauthier,J. Omar Ocegueda Gonzalez,Michael Paquette,Samuel St-Jean,Gabriel Girard,François Rheault,Jasmeen Sidhu,Chantal M. W. Tax,Fenghua Guo,Hamed Y. Mesri,Szabolcs David,Martijn Froeling,Anneriet M. Heemskerk,Alexander Leemans,Arnaud Boré,Basile Pinsard,Christophe Bedetti,Matthieu Desrosiers,Simona M. Brambati,Julien Doyon,Alessia Sarica,Roberta Vasta,Antonio Cerasa,Aldo Quattrone,Jason D. Yeatman,Ali R. Khan,Wes Hodges,Simon Alexander,David Romascano,Muhamed Barakovic,Anna Auría,Oscar Esteban,Alia Lemkaddem,Jean-Philippe Thiran,Hasan Ertan Cetingul,Benjamin L. Odry,Boris Mailhe,Mariappan S. Nadar,Fabrizio Pizzagalli,Gautam Prasad,Julio E. Villalon-Reina,Justin Galvis,Paul M. Thompson,Francisco De Santiago Requejo,Pedro Luque Laguna,Luis Miguel Lacerda,Rachel Barrett,Flavio Dell'Acqua,Marco Catani,Laurent Petit,Emmanuel Caruyer,Alessandro Daducci,Tim B. Dyrby,Tim Holland-Letz,Claus C. Hilgetag,Bram Stieltjes,Maxime Descoteaux +76 more
TL;DR: The results demonstrate fundamental ambiguities inherent to tract reconstruction methods based on diffusion orientation information, with critical consequences for the approach of diffusion tractography in particular and human connectivity studies in general.