F
Fu Jin Wei
Researcher at Academia Sinica
Publications - 4
Citations - 729
Fu Jin Wei is an academic researcher from Academia Sinica. The author has contributed to research in topics: Genome & Genomics. The author has an hindex of 3, co-authored 4 publications receiving 584 citations.
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Journal ArticleDOI
Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza
Joshua C. Stein,Yeisoo Yu,Dario Copetti,Dario Copetti,Derrick J. Zwickl,Li Zhang,Chengjun Zhang,Kapeel Chougule,Kapeel Chougule,Dongying Gao,Aiko Iwata,Jose Luis Goicoechea,Sharon Wei,Jun Wang,Yi Liao,Muhua Wang,Muhua Wang,Julie Jacquemin,Julie Jacquemin,Claude Becker,Dave Kudrna,Jianwei Zhang,Carlos E.M. Londono,Xiang Song,Seunghee Lee,Paul L. Sanchez,Paul L. Sanchez,Andrea Zuccolo,Andrea Zuccolo,Jetty S.S. Ammiraju,Jetty S.S. Ammiraju,Jayson Talag,Ann Danowitz,Luis F. Rivera,Andrea R. Gschwend,Christos Noutsos,Cheng chieh Wu,Cheng chieh Wu,Shu-Min Kao,Shu-Min Kao,Jhih wun Zeng,Fu Jin Wei,Qiang Zhao,Qi Feng,Moaine El Baidouri,Marie-Christine Carpentier,Eric Lasserre,Richard Cooke,Daniel da Rosa Farias,Luciano Carlos da Maia,Railson Schreinert dos Santos,Kevin G. Nyberg,Kenneth L. McNally,Ramil Mauleon,Nickolai Alexandrov,Jeremy Schmutz,Dave Flowers,Chuanzhu Fan,Detlef Weigel,Kshirod K. Jena,Thomas Wicker,Mingsheng Chen,Bin Han,Robert J Henry,Yue-Ie C. Hsing,Nori Kurata,Antonio Costa de Oliveira,Olivier Panaud,Scott A. Jackson,Carlos A. Machado,Michael J. Sanderson,Manyuan Long,Doreen Ware,Doreen Ware,Rod A. Wing,Rod A. Wing +75 more
TL;DR: This study resolves controversial areas of the Oryza phylogeny, showing a complex history of introgression among different chromosomes in the young ‘AA’ subclade containing the two domesticated species and announcing many new haplotypes of potential use for future crop protection.
Journal ArticleDOI
The Rice Annotation Project Database (RAP-DB): 2008 update
Tsuyoshi Tanaka,Baltazar A. Antonio,Shoshi Kikuchi,Takashi Matsumoto,Yoshiaki Nagamura,Hisataka Numa,Hiroaki Sakai,Jianzhong Wu,Takeshi Itoh,Takeshi Itoh,Takuji Sasaki,Ryo Aono,Yasuyuki Fujii,Takuya Habara,Erimi Harada,Masako Kanno,Yoshihiro Kawahara,Hiroaki Kawashima,Hiromi Kubooka,Akihiro Matsuya,Hajime Nakaoka,Naomi Saichi,Ryoko Sanbonmatsu,Yoshiharu Sato,Yuji Shinso,Mami Suzuki,Jun-ichi Takeda,Motohiko Tanino,Fusano Todokoro,Kaori Yamaguchi,Naoyuki Yamamoto,Chisato Yamasaki,Tadashi Imanishi,Toshihisa Okido,Masahito Tada,Kazuho Ikeo,Yoshio Tateno,Takashi Gojobori,Yao-Cheng Lin,Fu Jin Wei,Yue-Ie C. Hsing,Qiang Zhao,Bin Han,Melissa Kramer,Richard W. McCombie,David Lonsdale,Claire O'Donovan,Eleanor J. Whitfield,Rolf Apweiler,Kanako O. Koyanagi,Jitendra P. Khurana,Saurabh Raghuvanshi,Nagendra K. Singh,Akhilesh K. Tyagi,Georg Haberer,Masaki Fujisawa,Satomi Hosokawa,Yukiyo Ito,Hiroshi Ikawa,Michie Shibata,Mayu Yamamoto,Richard Bruskiewich,Douglas R. Hoen,Thomas E. Bureau,Nobukazu Namiki,Hajime Ohyanagi,Yasumichi Sakai,Satoshi Nobushima,Katsumi Sakata,Roberto A. Barrero,Yutaka Sato,Alexandre Souvorov,Brian Smith-White,Tatiana Tatusova,Suyoung An,Gynheung An,Satoshi Oota,Galina Fuks,Joachim Messing,Karen R. Christie,Damien Lieberherr,Hyeran Kim,Andrea Zuccolo,Rod A. Wing,Kan Nobuta,Pamela J. Green,Cheng Lu,Blake C. Meyers,Cristian Chaparro,Benoît Piégu,Olivier Panaud,Manuel Echeverria +91 more
TL;DR: The latest version of the RAP-DB contains a variety of annotation data as follows: clone positions, structures and functions of 31 439 genes validated by cDNAs, RNA genes detected by massively parallel signature sequencing (MPSS) technology and sequence similarity, flanking sequences of mutant lines, transposable elements, etc.
Journal ArticleDOI
The Promoter Signatures in Rice LEA Genes Can Be Used to Build a Co-expressing LEA Gene Network
Stuart Meier,Chris Gehring,Cameron Ross MacPherson,Mandeep Kaur,Monique Maqungo,Sheela Reuben,Samson Muyanga,Ming Der Shih,Fu Jin Wei,Samart Wanchana,Ramil Mauleon,Aleksandar Radovanovic,Richard Bruskiewich,Tsuyoshi Tanaka,Bijayalaxmi Mohanty,Takeshi Itoh,Rod A. Wing,Takashi Gojobori,Takuji Sasaki,Sanjay Swarup,Yue-Ie C. Hsing,Vladimir B. Bajic +21 more
TL;DR: An ab initio method that identifies motif families in promoters of target gene groups, map these families to the promoters of all genes in the genome, and determine the best matches of each of the target group gene promoters with all other promoters is proposed.
Journal ArticleDOI
Publisher Correction: Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.
Joshua C. Stein,Yeisoo Yu,Dario Copetti,Dario Copetti,Derrick J. Zwickl,Li Zhang,Chengjun Zhang,Kapeel Chougule,Kapeel Chougule,Dongying Gao,Aiko Iwata,Jose Luis Goicoechea,Sharon Wei,Jun Wang,Yi Liao,Muhua Wang,Muhua Wang,Julie Jacquemin,Julie Jacquemin,Claude Becker,Dave Kudrna,Jianwei Zhang,Carlos E.M. Londono,Xiang Song,Seunghee Lee,Paul L. Sanchez,Paul L. Sanchez,Andrea Zuccolo,Andrea Zuccolo,Jetty S.S. Ammiraju,Jetty S.S. Ammiraju,Jayson Talag,Ann Danowitz,Luis F. Rivera,Andrea R. Gschwend,Christos Noutsos,Cheng chieh Wu,Cheng chieh Wu,Shu-Min Kao,Shu-Min Kao,Jhih wun Zeng,Fu Jin Wei,Qiang Zhao,Qi Feng,Moaine El Baidouri,Marie-Christine Carpentier,Eric Lasserre,Richard Cooke,Daniel da Rosa Farias,Luciano Carlos da Maia,Railson Schreinert dos Santos,Kevin G. Nyberg,Kenneth L. McNally,Ramil Mauleon,Nickolai Alexandrov,Jeremy Schmutz,Dave Flowers,Chuanzhu Fan,Detlef Weigel,Kshirod K. Jena,Thomas Wicker,Mingsheng Chen,Bin Han,Robert J Henry,Yue-Ie C. Hsing,Nori Kurata,Antonio Costa de Oliveira,Olivier Panaud,Scott A. Jackson,Carlos A. Machado,Michael J. Sanderson,Manyuan Long,Doreen Ware,Doreen Ware,Rod A. Wing,Rod A. Wing +75 more
TL;DR: This article was not made open access when initially published online, which was corrected before print publication.