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Michael Feldgarden
Researcher at National Institutes of Health
Publications - 35
Citations - 21095
Michael Feldgarden is an academic researcher from National Institutes of Health. The author has contributed to research in topics: Genome & Human microbiome. The author has an hindex of 24, co-authored 32 publications receiving 18253 citations. Previous affiliations of Michael Feldgarden include Broad Institute & Harvard University.
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Journal ArticleDOI
High-Quality Draft Genome Sequences of 28 Enterococcus sp. Isolates
Kelli L. Palmer,Karen Carniol,Karen Carniol,Janet M. Manson,Janet M. Manson,David I. Heiman,Terry Shea,Sarah Young,Qiandong Zeng,Dirk Gevers,Michael Feldgarden,Bruce W. Birren,Michael S. Gilmore,Michael S. Gilmore +13 more
TL;DR: The availability of draft genome sequences for 28 enterococcal strains of diverse origin, including the species Enterococcus faecalis, E. faecium,E.
Journal ArticleDOI
Proposal for assignment of allele numbers for mobile colistin resistance (mcr) genes.
Sally R. Partridge,Vincenzo Di Pilato,Yohei Doi,Michael Feldgarden,Daniel H. Haft,William Klimke,Samir Kumar-Singh,Jian-Hua Liu,Surbhi Malhotra-Kumar,Arjun B. Prasad,Gian Maria Rossolini,Stefan Schwarz,Jianzhong Shen,Timothy R. Walsh,Yang Wang,Basil Britto Xavier +15 more
TL;DR: This work proposes a nomenclature scheme for mcr genes that it hopes will be acceptable to researchers in this area and that will reduce future confusion.
Journal ArticleDOI
Identification of 50 Class D β-Lactamases and 65 Acinetobacter-Derived Cephalosporinases in Acinetobacter spp.
Bruno Périchon,Sylvie Goussard,Violaine Walewski,Lenka Krizova,Gustavo C. Cerqueira,Cheryl I. Murphy,Michael Feldgarden,Jennifer Wortman,Dominique Clermont,Alexandr Nemec,Patrice Courvalin +10 more
TL;DR: Overall, this study reveals a large pool of β-lactamases in different Acinetobacter spp.
Journal ArticleDOI
Phylogenomic Classification and the Evolution of Clonal Complex 5 Methicillin-Resistant Staphylococcus aureus in the Western Hemisphere
Lavanya Challagundla,Jinnethe Reyes,Iftekhar Rafiqullah,Daniel O. Sordelli,Gabriela Echániz-Aviles,Maria Elena Velazquez-Meza,Santiago Castillo-Ramírez,Nahuel Fittipaldi,Michael Feldgarden,Sinéad B. Chapman,Michael S. Calderwood,Lina P Carvajal,Sandra Rincon,Blake Hanson,Paul J. Planet,Cesar A. Arias,Cesar A. Arias,Lorena Diaz,D. Ashley Robinson +18 more
TL;DR: The study has determined the relationships of different clades and clones of CC5 and has revealed genomic changes for increased antibiotic resistance and decreased virulence associated with the expansions of these MRSA in the Western Hemisphere.
Journal Article
A framework for human microbiome research
Barbara A. Methé,Karen E. Nelson,Mihai Pop,Heather Huot Creasy,Michelle G. Giglio,Curtis Huttenhower,Dirk Gevers,Joseph F. Petrosino,Sahar Abubucker,Jonathan H. Badger,Asif T. Chinwalla,Ashlee M. Earl,Michael Fitzgerald,Robert S. Fulton,Kymberlie Hallsworth-Pepin,Elizabeth A. Lobos,Ramana Madupu,Vincent Magrini,John Martin,Makedonka Mitreva,Donna M. Muzny,Erica Sodergren,James Versalovic,Aye Wollam,Kim C. Worley,Jennifer R. Wortman,Sarah Young,Qiandong Zeng,Kjersti Aagaard,Olukemi O. Abolude,Emma Allen-Vercoe,Eric J. Alm,Lucia Alvarado,Gary L. Andersen,Scott Anderson,Elizabeth L. Appelbaum,Harindra Arachchi,Gary C. Armitage,Cesar Arze,Tulin Ayvaz,Carl C. Baker,Lisa Begg,Tsegahiwot Belachew,Veena Bhonagiri,Monika Bihan,Martin J. Blaser,Toby Bloom,Vivien Bonazzi,Paul Brooks,Gregory A. Buck,Christian J. Buhay,Dana A. Busam,Joseph L. Campbell,Shane Canon,Brandi L. Cantarel,Patrick S. G. Chain,I-Min A. Chen,Lei Chen,Shaila Chhibba,Ken Chu,Dawn Ciulla,Jose C. Clemente,Sandra W. Clifton,Sean Conlan,Jonathan Crabtree,Mary A. Cutting,Noam J. Davidovics,Catherine C. Davis,Todd Z. DeSantis,Carolyn Deal,Kimberley D. Delehaunty,Floyd E. Dewhirst,Elena Deych,Yan Ding,David J. Dooling,Shannon Dugan,W. Michael Dunne,A. Scott Durkin,Robert C. Edgar,Rachel L. Erlich,Candace N. Farmer,Ruth M. Farrell,Karoline Faust,Michael Feldgarden,Victor Felix,Sheila A. Fisher,Anthony A. Fodor,Larry J. Forney,Leslie Foster,Valentina Di Francesco,Jonathan Friedman,Dennis C. Friedrich,Catrina Fronick,Lucinda Fulton,Hongyu Gao,Nathalia Garcia,Georgia Giannoukos,Christina Giblin,Maria Y. Giovanni,Jonathan M. Goldberg,Johannes B. Goll,Antonio Gonzalez,Allison D. Griggs,Sharvari Gujja,Brian J. Haas,Holli A. Hamilton,Emily L. Harris,Theresa A. Hepburn,Brandi Herter,Diane E. Hoffmann,Michael Holder,Clinton Howarth,Katherine H. Huang,Susan M. Huse,Jacques Izard,Janet K. Jansson,Huaiyang Jiang,Craig T. Jordan,Vandita Joshi,James A. Katancik,Wendy A. Keitel,Scott T. Kelley,Cristyn Kells,Susan Kinder-Haake,Nicholas B. King,Rob Knight,Dan Knights,Heidi H. Kong,Omry Koren,Sergey Koren,Karthik Kota,Christie Kovar,Nikos C. Kyrpides,Patricio S. La Rosa,Sandra L. Lee,Katherine P. Lemon,Niall J. Lennon,Cecil M. Lewis,Lora Lewis,Ruth E. Ley,Kelvin Li,Konstantinos Liolios,Bo Liu,Yue Liu,Chien-Chi Lo,Catherine A. Lozupone,R. Dwayne Lunsford,Tessa Madden,Anup Mahurkar,Peter J. Mannon,Elaine R. Mardis,Victor M. Markowitz,Konstantinos Mavrommatis,Jamison McCorrison,Daniel McDonald,Jean E. McEwen,Amy L. McGuire,Pamela McInnes,Teena Mehta,Kathie A. Mihindukulasuriya,Jason R. Miller,Patrick Minx,Irene Newsham,Chad Nusbaum,Michelle O'Laughlin,Joshua Orvis,Ioanna Pagani,Krishna Palaniappan,Shital M. Patel,Matthew D. Pearson,Jane Peterson,Mircea Podar,Craig Pohl,Katherine S. Pollard,Margaret Priest,Lita M. Proctor,Xiang Qin,Jeroen Raes,Jacques Ravel,Jeffrey G. Reid,Mina Rho,Rosamond Rhodes,Kevin Riehle,Maria C. Rivera,Beltran Rodriguez-Mueller,Yu-Hui Rogers,Matthew C. Ross,Carsten Russ,Ravi Sanka,Pamela Sankar,J. Fah Sathirapongsasuti,Jeffery A. Schloss,Patrick D. Schloss,Thomas M. Schmidt,Matthew B. Scholz,Lynn M. Schriml,Alyxandria M. Schubert,Nicola Segata,Julia A. Segre,William D. Shannon,Richard R. Sharp,Thomas J. Sharpton,Narmada Shenoy,Nihar U. Sheth,Gina A. Simone,Indresh Singh,Christopher Smillie,Jack D. Sobel,Daniel D. Sommer,Paul Spicer,Granger G. Sutton,Sean M. Sykes,Diana Tabbaa,Mathangi Thiagarajan,Chad Tomlinson,Manolito Torralba,Todd J. Treangen,Rebecca Truty,Tatiana A. Vishnivetskaya,Jason Walker,Lu Wang,Zhengyuan Wang,Doyle V. Ward,Wesley C. Warren,Mark A. Watson,Christopher Wellington,Kris A. Wetterstrand,James R. White,Katarzyna Wilczek-Boney,Yuan Qing Wu,Kristine M. Wylie,Todd Wylie,Chandri N. Yandava,Liang Ye,Yuzhen Ye,Shibu Yooseph,Bonnie P. Youmans,Lan Zhang,Yanjiao Zhou,Yiming Zhu,Laurie Zoloth,Jeremy Zucker,Bruce W. Birren,Richard A. Gibbs,Sarah K. Highlander,George M. Weinstock,Richard K. Wilson,Owen White +247 more
TL;DR: Resources from a population of 242 healthy adults sampled at 15 or 18 body sites up to three times are presented, which have generated 5,177 microbial taxonomic profiles from 16S ribosomal RNA genes and over 3.5 terabases of metagenomic sequence so far.