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Nilanjana Banerjee
Publications - 14
Citations - 1130
Nilanjana Banerjee is an academic researcher. The author has contributed to research in topics: Exome & Medicine. The author has an hindex of 7, co-authored 7 publications receiving 335 citations.
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Journal ArticleDOI
Exome sequencing and characterization of 49,960 individuals in the UK Biobank.
Cristopher V. Van Hout,Ioanna Tachmazidou,Ioanna Tachmazidou,Joshua D. Backman,Joshua D. Hoffman,Daren Liu,Ashutosh K. Pandey,Claudia Gonzaga-Jauregui,Shareef Khalid,Bin Ye,Nilanjana Banerjee,Alexander H. Li,Colm O'Dushlaine,Anthony Marcketta,Jeffrey Staples,Claudia Schurmann,Claudia Schurmann,Alicia Hawes,Evan Maxwell,Leland Barnard,Alexander Lopez,John Penn,Lukas Habegger,Andrew Blumenfeld,Xiaodong Bai,Sean O'Keeffe,Ashish Yadav,Kavita Praveen,Marcus B. Jones,William J Salerno,Wendy K. Chung,Ida Surakka,Cristen J. Willer,Kristian Hveem,Joseph B. Leader,David J. Carey,David H. Ledbetter,Lon R. Cardon,George D. Yancopoulos,Aris N. Economides,Giovanni Coppola,Alan R. Shuldiner,Suganthi Balasubramanian,Michael N. Cantor,Matthew R. Nelson,John C. Whittaker,Jeffrey G. Reid,Jonathan Marchini,John D. Overton,Robert A. Scott,Gonçalo R. Abecasis,Laura M. Yerges-Armstrong,Aris Baras +52 more
TL;DR: The release of exome-sequence data for the first 49,960 study participants, revealing approximately 4 million coding variants, illustrating the power of characterizing LOF variants in this population through association analyses across 1,730 phenotypes and demonstrating the value of genome sequencing in large population-based studies.
Journal ArticleDOI
Exome sequencing and analysis of 454,787 UK Biobank participants.
Joshua D. Backman,Alexander H. Li,Anthony Marcketta,Dylan Sun,Joelle Mbatchou,Michael D. Kessler,Christian Benner,Daren Liu,Adam E. Locke,Suganthi Balasubramanian,Ashish Yadav,Nilanjana Banerjee,Christopher E. Gillies,Amy Damask,Simon Liu,Xiaodong Bai,Alicia Hawes,Evan Maxwell,Lauren Gurski,Kyoko Watanabe,Jack A. Kosmicki,Veera M. Rajagopal,Jason Mighty,Marcus B. Jones,Lyndon J. Mitnaul,Eli A. Stahl,Giovanni Coppola,Eric Jorgenson,Lukas Habegger,William J Salerno,Alan R. Shuldiner,Luca A. Lotta,John D. Overton,Michael N. Cantor,Jeffrey G. Reid,George D. Yancopoulos,Hyun Min Kang,Jonathan Marchini,Aris Baras,Gonçalo R. Abecasis,Manuel A. R. Ferreira +40 more
TL;DR: This paper used exome sequencing to explore protein altering variants and their consequences in 454,787 UK Biobank study participants and identified 12 million coding variants, including ~1 million loss-of-function and ~1.8 million deleterious missense variants.
Genome-wide association and Mendelian randomisation analysis provide insights into the pathogenesis of heart failure
Sonia Shah,Albert Henry,Carolina Roselli,Honghuang Lin,Gardar Sveinbjornsson,Ghazaleh Fatemifar,Åsa K. Hedman,Jemma B. Wilk,Michael Morley,Mark Chaffin,Anna Helgadottir,Niek Verweij,Abbas Dehghan,Peter Almgren,Charlotte Andersson,Krishna G. Aragam,Johan Ärnlöv,Joshua D. Backman,Mary L. Biggs,Heather L. Bloom,Jeffrey Brandimarto,Michael R. Brown,Leonard Buckbinder,David J. Carey,Daniel I. Chasman,Xing Chen,Xu Chen,Jonathan H. Chung,William A. Chutkow,James P. Cook,Graciela E. Delgado,Spiros Denaxas,Alex S. F. Doney,Marcus Doerr,Samuel C. Dudley,Michael E. Dunn,Gunnar Engström,Tõnu Esko,Stephan B. Felix,Chris Finan,Ian Ford,Mohsen Ghanbari,Sahar Ghasemi,Vilmantas Giedraitis,Franco Giulianini,John S. Gottdiener,Stefan Gross,Daniel F. Gudbjartsson,Rebecca Gutmann,Christopher M. Haggerty,Pim van der Harst,Craig L. Hyde,Erik Ingelsson,J. Wouter Jukema,Maryam Kavousi,Kay-Tee Khaw,Marcus E. Kleber,Lars Køber,Andrea Koekemoer,Claudia Langenberg,Lars Lind,Cecilia M. Lindgren,Barry London,Luca A. Lotta,Ruth C. Lovering,Jian'an Luan,Patrik K. E. Magnusson,Anubha Mahajan,Kenneth B. Margulies,Winfried Maerz,Olle Melander,Ify R. Mordi,Thomas M. Morgan,Andrew D. Morris,Andrew P. Morris,Alanna C. Morrison,Michael W. Nagle,Christopher P. Nelson,Alexander Niessner,Teemu J. Niiranen,Michelle L. O'Donoghue,Anjali T. Owens,Colin N. A. Palmer,Helen M. Parry,Markus Perola,Eliana Portilla-Fernandez,Bruce M. Psaty,Kenneth Rice,Paul M. Ridker,Simon P. R. Romaine,Jerome I. Rotter,Perttu Salo,Veikko Salomaa,Jessica van Setten,Alaa Shalaby,Diane T. Smelser,Nicholas L. Smith,Steen Stender,David J. Stott,Per Svensson,Mari-Liis Tammesoo,Kent D. Taylor,Maris Teder-Laving,Alexander Teumer,Gudmundur Thorgeirsson,Unnur Thorsteinsdottir,Christian Torp-Pedersen,Stella Trompet,Benoit Tyl,André G. Uitterlinden,Abirami Veluchamy,Uwe Voelker,Adriaan A. Voors,Xiaosong Wang,Nicholas J. Wareham,Dawn M. Waterworth,Peter Weeke,Raul Weiss,Kerri L. Wiggins,Heming Xing,Laura M. Yerges-Armstrong,Bing Yu,Faiez Zannad,Jing Hua Zhao,Harry Hemingway,Nilesh J. Samani,John J.V. McMurray,Jian Yang,Peter M. Visscher,Christopher Newton-Cheh,Anders Mälarstig,Hilma Holm,Steven A. Lubitz,Naveed Sattar,Michael V. Holmes,Thomas P. Cappola,Folkert W. Asselbergs,Aroon D. Hingorani,Karoline Kuchenbaecker,Patrick T. Ellinor,Chim C. Lang,Kari Stefansson,J. Gustav Smith,Ramachandran S. Vasan,Daniel I. Swerdlow,R. Thomas Lumbers,Gonçalo R. Abecasis,Joshua D. Backman,Xiaodong Bai,Suganthi Balasubramanian,Nilanjana Banerjee,Aris Baras,Leland Barnard,Christina Beechert,Andrew Blumenfeld,Michael N. Cantor,Yating Chai,Giovanni Coppola,Amy Damask,Frederick E. Dewey,Aris N. Economides,Gisu Eom,Caitlin Forsythe,Erin D. Fuller,Zhenhua Gu,Lauren Gurski,Paloma M. Guzzardo,Lukas Habegger,Young Hahn,Alicia Hawes,Cristopher V. Van Hout,Marcus B. Jones,Shareef Khalid,Michael Lattari,Alexander H. Li,Nan Lin,Daren Liu,Alexander Lopez,Kia Manoochehri,Jonathan Marchini,Anthony Marcketta,Evan Maxwell,Shane A. McCarthy,Lyndon J. Mitnaul,Colm O'Dushlaine,John D. Overton,Maria Sotiropoulos Padilla,Charles Paulding,John Penn,Manasi Pradhan,Jeffrey G. Reid,Thomas D. Schleicher,Claudia Schurmann,Alan R. Shuldiner,Jeffrey Staples,Dylan Sun,Karina Toledo,Ricardo H. Ulloa,Louis Widom,Sarah E. Wolf,Ashish Yadav,Bin Ye +201 more
TL;DR: In this paper, the authors report results from a genome-wide association studies (GWAS) meta-analysis of heart failure comprising 47,309 cases and 930,014 controls.
Posted ContentDOI
Whole exome sequencing and characterization of coding variation in 49,960 individuals in the UK Biobank
Cristopher V. Van Hout,Ioanna Tachmazidou,Joshua D. Backman,Joshua D. Hoffman,Bin Ye,Ashutosh K. Pandey,Claudia Gonzaga-Jauregui,Shareef Khalid,Daren Liu,Nilanjana Banerjee,Alexander H. Li,O’Dushlaine Colm,Anthony Marcketta,Jeffrey Staples,Claudia Schurmann,Alicia Hawes,Evan Maxwell,Leland Barnard,Alexander Lopez,John Penn,Lukas Habegger,Andrew Blumenfeld,Ashish Yadav,Kavita Praveen,Marcus B. Jones,William J Salerno,Wendy K. Chung,Ida Surakka,Cristen J. Willer,Kristian Hveem,Joseph B. Leader,David J. Carey,David H. Ledbetter,Lon R. Cardon,George D. Yancopoulos,Aris N. Economides,Giovanni Coppola,Alan R. Shuldiner,Suganthi Balasubramanian,Michael N. Cantor,Matthew R. Nelson,John C. Whittaker,Jeffrey G. Reid,Jonathan Marchini,John D. Overton,Robert A. Scott,Gonçalo R. Abecasis,Laura M. Yerges-Armstrong,Aris Baras +48 more
TL;DR: The first tranche of large-scale exome sequence data for 49,960 study participants is described, revealing approximately 4 million coding variants and 231,631 predicted loss of function variants, a >10-fold increase compared to imputed sequence for the same participants.
Journal ArticleDOI
Genome-wide analysis provides genetic evidence that ACE2 influences COVID-19 risk and yields risk scores associated with severe disease
Julie Horowitz,Jack A. Kosmicki,Amy Damask,Deepika Sharma,Genevieve H.L. Roberts,Anne E. Justice,Nilanjana Banerjee,Marie V. Coignet,Ashish Yadav,Joseph B. Leader,Anthony Marcketta,Danny S. Park,Evan Maxwell,Spencer C. Knight,Xiaodong Bai,Harendra Guturu,Dylan Sun,Asher Baltzell,Fabrício S. P. Kury,Joshua D. Backman,Ahna R. Girshick,Colm O'Dushlaine,Shannon McCurdy,Raghavendran Partha,Adam Mansfield,David A. Turissini,Miao Zhang,Joelle Mbatchou,Kyoko Watanabe,Lauren Gurski,Shane McCarthy,L. Dobbyn,Elisabeth Stahl,Anurag Verma,Giorgio Sirugo,Giovanni Coppola,Andrew Deubler,Aris Bass Economides,Katia Karalis,Luca A. Lotta,Alan R. Shuldiner,Christina Beechert,Caitlin Forsythe,Erin D. Fuller,Zhenhua Gu,Michael Lattari,Alexander Lopez,Maria Sotiropoulos Padilla,Manasi Pradhan,Kia Manoochehri,Thomas D. Schleicher,Louis Widom,Sarah E. Wolf,Ricardo H. Ulloa,Amelia Dadong Sameer Jeffrey Averitt Li Malhotra Staples,Amelia J Averitt,Dadong Li,Sameer Malhotra,Suying Bao,Boris Boutkov,Siying Chen,Gi Seon Eom,Alicia Hawes,Shareef Khalid,Olga A. Krasheninina,George Mitra,Mona Nafde,Sean O’Keeffe,Max Orelus,Razvan Panea,Tommy Polanco,Ayesha Ghulam Rasool,Jeffrey Staples,Kathie Sun,Jiwen Xin,Manuel A. R. Ferreira,Arkopravo Ghosh,Christopher Gillies,Eric Jorgenson,Hyun Min Kang,Michael Kessler,Alexander H. Li,Nan Lin,Daren Liu,Adam E. Locke,Arden Moscati,Charles Paulding,Carlo Sidore,Bin Ye,B. Zhang,Andrey Ziyatdinov,Ariane Ayer,Aysegul Guvenek,George Hindy,Jan Freudenberg,Jonas Bovijn,Kavita Praveen,Manav Kapoor,M. Haas,Moeen Riaz,Niek Verweij,Olukayode A. Sosina,Parsa Akbari,Priyanka Nakka,Sahar Gelfman,Sujit Gokhale,Tanima De,Veera M. Rajagopal,Gannie Tzoneva,Juan L. Rodriguez-Flores,Shek Man Chim,Valerio Donato,Daniel Fernandez,G. Della Gatta,Alessandro Di Gioia,Kristen Michelle Howell,Lori Khrimian,Minhee Kim,Hector Martinez,Lawrence Miloscio,Sheilyn Nunez,Elias Pavlopoulos,Trikaldarshi Persaud,Esteban Marcus B. Michelle G. Jason Lyndon J. Nirupama Nad Chen Jones LeBlanc Mighty Mitnaul Nishtala Rana,Esteban Chen,Michelle G. LeBlanc,Jason Mighty,Lyndon J. Mitnaul,N. Sudhir Nishtala,N. Rana,Marylyn D. Ritchie,Marcus B. Jones,Suganthi Balasubramanian,Katherine A. Siminovitch,William J Salerno,Daniel J. Rader,Tooraj Mirshahi,Jonathan Marchini,John D. Overton,David J. Carey,Lukas Habegger,Michael Cantor,Kristin A. Rand,Eurie L. Hong,Jeffrey G. Reid,Catherine A. Ball,Aris Baras,Gonçalo R. Abecasis +147 more
TL;DR: In this article , the authors identify a variant (rs190509934, minor allele frequency 0.2-2%) that downregulates ACE2 expression by 37% and reduces the risk of SARS-CoV-2 infection by 40% (odds ratio = 0.60, P = 4.5 × 10 − 13 ).