S
Stephanie Kehr
Researcher at Leipzig University
Publications - 26
Citations - 1019
Stephanie Kehr is an academic researcher from Leipzig University. The author has contributed to research in topics: Small nucleolar RNA & Adipose tissue. The author has an hindex of 13, co-authored 22 publications receiving 861 citations. Previous affiliations of Stephanie Kehr include Max Planck Society.
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Journal ArticleDOI
The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
Yinhua Huang,Yinhua Huang,Yingrui Li,David W. Burt,Hualan Chen,Yong Zhang,Wubin Qian,Heebal Kim,Shangquan Gan,Yiqiang Zhao,Jianwen Li,Kang Yi,Huapeng Feng,Pengyang Zhu,Bo Li,Qiuyue Liu,Susan Fairley,Katharine E. Magor,Zhenlin Du,Xiaoxiang Hu,Laurie Goodman,Hakim Tafer,Hakim Tafer,Alain Vignal,Taeheon Lee,Kyu-Won Kim,Zheya Sheng,Yang An,Steve Searle,Javier Herrero,Martien A. M. Groenen,Richard P. M. A. Crooijmans,Thomas Faraut,Qingle Cai,Robert G. Webster,Jerry R. Aldridge,Wesley C. Warren,Sebastian Bartschat,Stephanie Kehr,Manja Marz,Peter F. Stadler,Peter F. Stadler,Jacqueline Smith,Robert H. S. Kraus,Yaofeng Zhao,Liming Ren,Jing Fei,Mireille Morisson,Peter K. Kaiser,Darren K. Griffin,Man Rao,Frédérique Pitel,Jun Wang,Ning Li +53 more
TL;DR: The duck genome sequence and deep transcriptome analyses are presented and it is shown how the duck's defense mechanisms against influenza infection have been optimized through the diversification of its β-defensin and butyrophilin-like repertoires.
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An updated human snoRNAome
Hadi Jorjani,Stephanie Kehr,Dominik J. Jedlinski,Rafal Gumienny,Jana Hertel,Peter F. Stadler,Mihaela Zavolan,Andreas Gruber +7 more
TL;DR: This study characterizes the plasticity of snoRNA expression identifying both constitutively as well as cell type specific expressed snoRNAs and re-estimate the sno RNA target RNA interaction network.
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The Coilin Interactome Identifies Hundreds of Small Noncoding RNAs that Traffic through Cajal Bodies
Martin Machyna,Stephanie Kehr,Korinna Straube,Korinna Straube,Dennis Kappei,Frank Buchholz,Falk Butter,Jernej Ule,Jana Hertel,Peter F. Stadler,Karla M. Neugebauer,Karla M. Neugebauer +11 more
TL;DR: Coilin protein scaffolds Cajal bodies (CBs) -subnuclear compartments enriched in small nuclear RNAs (snRNAs)-and promotes efficient spliceosomal snRNP assembly and makes CBs the cellular hub of small ncRNA metabolism.
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Homology-based annotation of non-coding RNAs in the genomes of Schistosoma mansoni and Schistosoma japonicum
Claudia S. Copeland,Claudia S. Copeland,Manja Marz,Dominic Rose,Jana Hertel,Paul J. Brindley,Clara Isabel Bermudez Santana,Clara Isabel Bermudez Santana,Stephanie Kehr,Camille Stephan-Otto Attolini,Peter F. Stadler +10 more
TL;DR: The ncRNA sequences and structures presented here represent the most complete dataset of ncRNAs from any lophotrochozoan reported so far and provides an important reference for further analysis of the genomes of schistosomes and indeed eukaryotic genomes at large.
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RNAsnoop: efficient target prediction for H/ACA snoRNAs
TL;DR: RNAsnoop implements a dynamic programming algorithm that computes thermodynamically optimal H/ACA-RNA interactions in an efficient scanning variant, and is applied to identify the snoRNAs that are responsible for several of the remaining 'orphan' pseudouridine modifications in human rRNAs.