Technical University of Denmark

About: Technical University of Denmark is a education organization based out in Kongens Lyngby, Hovedstaden, Denmark. It is known for research contribution in the topics: Population & Catalysis. The organization has 24126 authors who have published 66394 publications receiving 2443649 citations. The organization is also known as: Danmarks Tekniske Universitet & DTU.

Distribution, Organization, and Ecology of Bacteria in Chronic Wounds

Abstract: Between 1 and 2% of the population in the developed world experiences a nonhealing or chronic wound characterized by an apparent arrest in a stage dominated by inflammatory processes. Lately, research groups have proposed that bacteria might be involved in and contribute to the lack of healing of these wounds. To investigate this, we collected and examined samples from chronic wounds obtained from 22 different patients, all selected because of suspicion of Pseudomonas aeruginosa colonization. These wound samples were investigated by standard culturing methods and peptide nucleic acid-based fluorescence in situ hybridization (PNA FISH) for direct identification of bacteria. By means of the culturing methods, Staphylococcus aureus was detected in the majority of the wounds, whereas P. aeruginosa was observed less frequently. In contrast, using PNA FISH, we found that a large fraction of the wounds contained P. aeruginosa. Furthermore, PNA FISH revealed the structural organization of bacteria in the samples. It appeared that P. aeruginosa aggregated as microcolonies imbedded in the matrix component alginate, which is a characteristic hallmark of the biofilm mode of growth. The present investigation suggests that bacteria present within these wounds tend to be aggregated in microcolonies imbedded in a self-produced matrix, characteristic of the biofilm mode of growth. Additionally, we must conclude that there exists no good correlation between bacteria detected by standard culturing methods and those detected by direct detection methods such as PNA FISH. This strongly supports the development of new diagnostic and treatment strategies for chronic wounds.

Inconsistency in large pharmacogenomic studies

Abstract: Two large-scale pharmacogenomic studies were published recently in this journal. Genomic data are well correlated between studies; however, the measured drug response data are highly discordant. Although the source of inconsistencies remains uncertain, it has potential implications for using these outcome measures to assess gene-drug associations or select potential anticancer drugs on the basis of their reported results.

Microplastic exposure studies should be environmentally realistic

Abstract: To understand the impact of microplastic (MP) pollution to aquatic ecosystems, it is important to identify the mechanisms of interaction with organisms. Exposure experiments, like the study of Sussarellu et al. (1) recently published in PNAS, may provide such insights. However, the results of dose–response experiments must always be interpreted in light of environmental concentrations, and the experimental concentrations examined by Sussarellu et al. (1) and several others (2⇓⇓⇓⇓⇓–8) are orders-of-magnitude higher than those reported from field studies (Fig. 1). Fig. 1. Comparison between MP concentrations used in exposure studies (fat colored lines) and observed environmental levels (red diamonds: average concentrations; error bars: minimum and maximum concentration). The red line extrapolates the field data with best … [↵][1]1To whom correspondence should be addressed. Email: roble{at}aqua.dtu.dk. [1]: #xref-corresp-1-1

A density functional for sparse matter

Abstract: Sparse matter is abundant and has both strong local bonds and weak nonbonding forces, in particular nonlocal van der Waals (vdW) forces between atoms separated by empty space. It encompasses a broad spectrum of systems, like soft matter, adsorption systems and biostructures. Density-functional theory (DFT), long since proven successful for dense matter, seems now to have come to a point, where useful extensions to sparse matter are available. In particular, a functional form, vdW-DF (Dion et al 2004 Phys. Rev. Lett. 92 246401; Thonhauser et al 2007 Phys. Rev. B 76 125112), has been proposed for the nonlocal correlations between electrons and applied to various relevant molecules and materials, including to those layered systems like graphite, boron nitride and molybdenum sulfide, to dimers of benzene, polycyclic aromatic hydrocarbons (PAHs), doped benzene, cytosine and DNA base pairs, to nonbonding forces in molecules, to adsorbed molecules, like benzene, naphthalene, phenol and adenine on graphite, alumina and metals, to polymer and carbon nanotube (CNT) crystals, and hydrogen storage in graphite and metal–organic frameworks (MOFs), and to the structure of DNA and of DNA with intercalators. Comparison with results from wavefunction calculations for the smaller systems and with experimental data for the extended ones show the vdW-DF path to be promising. This could have great ramifications.

A new Approach to Variable-Topology Shape Design Using a Constraint on the Perimeter

Abstract: This paper introduces a method for variable-topology shape optimization of elastic structures called theperimeter method. An upper-bound constraint on the perimeter of the solid part of the structure ensures a well-posed design problem. The perimeter constraint allows the designer to control the number of holes in the optimal design and to establish their characteristic length scale. Finite element implementations generate practical designs that are convergent with respect to grid refinement. Thus, an arbitrary level of geometric resolution can be achieved, so single-step procedures for topology design and detailed shape design are possible. The perimeter method eliminates the need for relaxation, thereby circumventing many of the complexities and restrictions of other approaches to topology design.