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Disease as a result of violations of the symbiotic relationship between the host and the microbiota with pathogens

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TLDR
The authors propose a new theory of medicine: "the theory of noospheric-anthropogenic harmony", which is based on using a new class of drugs metabiotics, which in their term influence microbiota.
Abstract
Recent achievements in many sciences have led to an understanding of the need to form new ideas about the nature of human relationships with the environment and the inner world, his health, the principles of disease formation and their prevention. There has been a transition from a collection of achievements of various sciences to a holistic paradigm that unites a person as an organism and as a person, his inner and surrounding world. It became obvious that this could not be done within the framework of the previous general theories of medicine. To this end, the authors propose a new theory of medicine: "the theory of noospheric-anthropogenic harmony". From the standpoint of this theory, the mechanisms of the relationship of microbiota and pathogens with the protective and acceptive immunity of a healthy and sick person, as well as the mechanisms of microbiota regulation, are considered. The paradigm of dysbiosis as the cause of many diseases and main homeostatic mechanisms that provide symbiotic relationships of microbiota, immunity and its role in the mechanisms of natural tolerance and formation of various disease, such as, autoimmune ones and tumors, require a change in the acceptedtreatment and prevention. A new approach should be based on using a new class of drugs — metabiotics, which in their term influence microbiota.

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References
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The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host–microbial interactions

TL;DR: The colon mucus is organized in two layers: an inner, stratified mucus layer that is firmly adherent to the epithelial cells and approximately 50 μm thick; and an outer, nonattached layer, usually approximately 100 μm thickness as measured in mouse.
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Angiogenins: a new class of microbicidal proteins involved in innate immunity

TL;DR: It is shown that a previously uncharacterized angiogenin, Ang4, is produced by mouse Paneth cells, is secreted into the gut lumen and has bactericidal activity against intestinal microbes, revealing a mechanism whereby intestinal commensal bacteria influence gut microbial ecology and shape innate immunity.
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Intestinal Bacteria and the Regulation of Immune Cell Homeostasis

TL;DR: A review of the bacterial composition of the mammalian intestine, known bacterial-derived immunoregulatory molecules, and the mammalian innate immune receptors that recognize them and the mechanisms by which these signals modulate the development and progression of inflammatory disease.
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New concepts in the generation and functions of IgA

TL;DR: In this paper, the authors discuss pathways of IgA induction in the context of SIgA specificity and function, and discuss the role of the secretory immunoglobulin A in the regulation of host-commensal homeostasis.
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What is the role of dysbiosis in the development of human diseases?

Dysbiosis is considered the cause of many diseases and disrupts the symbiotic relationship between the host and the microbiota, leading to disease development.