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Open AccessJournal ArticleDOI

Finding community structure in very large networks.

TLDR
A hierarchical agglomeration algorithm for detecting community structure which is faster than many competing algorithms: its running time on a network with n vertices and m edges is O (md log n) where d is the depth of the dendrogram describing the community structure.
Abstract
The discovery and analysis of community structure in networks is a topic of considerable recent interest within the physics community, but most methods proposed so far are unsuitable for very large networks because of their computational cost. Here we present a hierarchical agglomeration algorithm for detecting community structure which is faster than many competing algorithms: its running time on a network with n vertices and m edges is O (md log n) where d is the depth of the dendrogram describing the community structure. Many real-world networks are sparse and hierarchical, with m approximately n and d approximately log n, in which case our algorithm runs in essentially linear time, O (n log(2) n). As an example of the application of this algorithm we use it to analyze a network of items for sale on the web site of a large on-line retailer, items in the network being linked if they are frequently purchased by the same buyer. The network has more than 400 000 vertices and 2 x 10(6) edges. We show that our algorithm can extract meaningful communities from this network, revealing large-scale patterns present in the purchasing habits of customers.

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Citations
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Journal ArticleDOI

Joint modeling of multiple time series via the beta process with application to motion capture segmentation

TL;DR: A Bayesian nonparametric approach to the problem of jointly modeling multiple related time series by considering time series produced by motion capture sensors on the joints of people performing exercise routines, which demonstrates promising results on unsupervised segmentation of human motion capture data.
Journal ArticleDOI

MTGO: PPI Network Analysis Via Topological and Functional Module Identification

TL;DR: MTGO correctly identifies molecular complexes and literature-consistent processes in an experimentally derived PPI network of Myocardial infarction, and shows largely better results than other state of the art algorithms when searching for small or sparse functional modules.
Journal ArticleDOI

CDLIB : a python library to extract, compare and evaluate communities from complex networks

TL;DR: The aim of CDlib is to allow easy and standardized access to a wide variety of network clustering algorithms, to evaluate and compare the results they provide, and to visualize them.
Journal ArticleDOI

A heuristic procedure for the automatic creation of district metered areas in water distribution systems

TL;DR: The results obtained show that the procedure makes it possible to identify very good solutions in terms of resilience and minimum pressures when reference to the peak demand and fire-flow conditions is made.
Journal ArticleDOI

Spectral methods for the detection of network community structure: a comparative analysis

TL;DR: Test results demonstrate that the normalized Laplacian matrix and the correlation matrix significantly outperform the other three matrices at identifying the community structure of networks, indicating that it is crucial to take into account the heterogeneous distribution of node degree when using spectral analysis for the detection of community structure.
References
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Journal ArticleDOI

Collective dynamics of small-world networks

TL;DR: Simple models of networks that can be tuned through this middle ground: regular networks ‘rewired’ to introduce increasing amounts of disorder are explored, finding that these systems can be highly clustered, like regular lattices, yet have small characteristic path lengths, like random graphs.

疟原虫var基因转换速率变化导致抗原变异[英]/Paul H, Robert P, Christodoulou Z, et al//Proc Natl Acad Sci U S A

宁北芳, +1 more
TL;DR: PfPMP1)与感染红细胞、树突状组胞以及胎盘的单个或多个受体作用,在黏附及免疫逃避中起关键的作�ly.
Journal ArticleDOI

Statistical mechanics of complex networks

TL;DR: In this paper, a simple model based on the power-law degree distribution of real networks was proposed, which was able to reproduce the power law degree distribution in real networks and to capture the evolution of networks, not just their static topology.
Journal ArticleDOI

The Structure and Function of Complex Networks

Mark Newman
- 01 Jan 2003 - 
TL;DR: Developments in this field are reviewed, including such concepts as the small-world effect, degree distributions, clustering, network correlations, random graph models, models of network growth and preferential attachment, and dynamical processes taking place on networks.
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