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Methylation in MIRLET7A3 Gene Induces the Expression of IGF-II and Its mRNA Binding Proteins IGF2BP-2 and 3 in Hepatocellular Carcinoma

TLDR
This study suggests that DNA hypermethylation leads to epigenetic repression of miR-let-7a in HCC cells, which induces the oncogenic IGF-signaling pathway.
Abstract
miR-let-7a is a tumor suppressor miRNA with reduced expression in most cancers. Methylation of MIRLET7A3 gene was reported to be the cause of this suppression in several cancers; however, it was not explicitly investigated in hepatocellular carcinoma (HCC). We aimed at investigating miR-let-7a expression and molecular mode in HCC, identifying drug-targetable networks, which might be affected by its abundance. Our results illustrated a significant repression of miR-let-7a, which correlated with hypermethylation of its gene of origin MIRLRT7A3. This was further supported by the induction of miR-let-7a expression upon treatment of HCC cells with a DNA-methyltransferase inhibitor. Using a computational approach, insulin-like growth factor (IGF)-II and IGF-2 mRNA binding proteins (IGF2BP)-2/-3 were identified as potential targets for miR-let-7a that was further confirmed experimentally. Indeed, miR-let-7a mimics diminished IGF-II as well as IGF2BP-2/-3 expression. Direct binding of miR-let-7a to each respective transcript was confirmed using a luciferase reporter assay. In conclusion, this study suggests that DNA hypermethylation leads to epigenetic repression of miR-let-7a in HCC cells, which induces the oncogenic IGF-signaling pathway.

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CRD-BP mediates stabillization of βTrCP1 and c-mys mRNA in response to β-catenin signalling

TL;DR: The authors showed that β-catenin stabilizes the mRNA encoding the F-box protein βTrCP1, and identified the RNA-binding protein CRD-BP (coding region determinant-binding proteins) as a previously unknown target of β-Catenin/Tcf transcription factor.
Journal ArticleDOI

MicroRNA: A signature for cancer progression.

TL;DR: In this article, the authors discuss several circulating miRNA signatures, their expression profiles in different types of cancer and their impacts on cellular processes, and use them to categorize genes that can affect oncogenic pathways in cancer.
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The role of IGF2BP2, an m6A reader gene, in human metabolic diseases and cancers

TL;DR: The human insulin-like growth factor 2 mRNA binding proteins 2 (IGF2BP2/IMP2) is an RNA-binding protein that regulates multiple biological processes as discussed by the authors.
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N 6 ‐methyladenosine (m 6 A) RNA modification in human cancer

TL;DR: This review aimed to summarize the current knowledge on the potential significance and molecular mechanisms of m6A RNA modification in the initiation and progression of cancer.
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The IGF2BP family of RNA binding proteins links epitranscriptomics to cancer.

TL;DR: In this paper , the regulatory roles of IGF2BP proteins and their molecular role as m6A modification readers to the cellular phenotype are summarized and a comprehensive insight into the IGF 2BP function is provided.
References
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Journal ArticleDOI

Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.

TL;DR: The GLOBOCAN series of the International Agency for Research on Cancer (IARC) as mentioned in this paper provides estimates of the worldwide incidence and mortality from 27 major cancers and for all cancers combined for 2012.
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The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans

TL;DR: It is shown that let-7 is a heterochronic switch gene that encodes a temporally regulated 21-nucleotide RNA that is complementary to elements in the 3′ untranslated regions of the heteroch chronic genes lin-14, lin-28, Lin-41, lin -42 and daf-12, indicating that expression of these genes may be directly controlled by let- 7.
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starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein–RNA interaction networks from large-scale CLIP-Seq data

TL;DR: This study developed starBase v2.0, which has been updated to provide the most comprehensive CLIP-Seq experimentally supported miRNA-mRNA and mi RNA-lncRNA interaction networks to date, and developed miRFunction and ceRNAFunction web servers to predict the function of miRNAs and other ncRNAs from themiRNA-mediated regulatory networks.
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CpG islands in vertebrate genomes.

TL;DR: It is shown that CpG islands in methylated genomes are maintained, despite a tendency for 5mCpG to mutate by deamination to TpG+CpA, by the structural stability of a high G+C content alone, and that C pG islands associated with exons result from some selective importance of the arginine codon CGX.
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Reduced Expression of the let-7 MicroRNAs in Human Lung Cancers in Association with Shortened Postoperative Survival

TL;DR: Reduced expression of let-7 in A549 lung adenocarcinoma cell line inhibited lung cancer cell growth in vitro and represents the first report of reduced expression ofLet-7 and the potential clinical and biological effects of such a microRNA alteration.
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