Journal ArticleDOI
Nature of the N-H...S hydrogen bond.
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It was shown that the S(1)-S(0) band origin red shifts in the N-H...S hydrogen-bonded complexes correlated well with the polarizability of the acceptor rather than their proton affinity, contrary to the trend observed in most X-H…Y hydrogen-Bonded systems.Abstract:
The N−H···S hydrogen-bonded complexes of the model compounds of tryptophan (indole and 3-methylindole) and methionine (dimethyl sulfide, Me2S) have been characterized by a combination of experimental techniques like resonant two-photon ionization (R2PI), resonant ion dip infrared spectroscopy (RIDIRS), and fluorescence dip infrared spectroscopy (FDIRS) and computational methods like ab initio electronic structure calculations, atoms-in-molecules (AIM), natural bond orbital (NBO), and energy decomposition analyses. The results are compared with the N−H···O (M·H2O; M = indole, 3-methyl indole) σ-type and N−H···Φ (M·benzene) π-type hydrogen-bonded complexes. It was shown that the S1−S0 band origin red shifts in the N−H···S hydrogen-bonded complexes correlated well with the polarizability of the acceptor rather than their proton affinity, contrary to the trend observed in most X−H···Y (X, Y = O, N, halogens, etc.) hydrogen-bonded systems. The red shift in the N−H stretching frequency in the N−H···S HB cluster...read more
Citations
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Relevance of Weak Hydrogen Bonds in the Conformation of Organic Compounds and Bioconjugates: Evidence from Recent Experimental Data and High-Level ab Initio MO Calculations
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Thiourea-catalysed ring opening of episulfonium ions with indole derivatives by means of stabilizing non-covalent interactions
Song Lin,Eric N. Jacobsen +1 more
TL;DR: It is shown that arylpyrrolidino amido thiourea catalysts catalyse the enantioselective nucleophilic ring opening of episulfonium ions by indoles, a step in the rate- and selectivity-determining step of small-molecule catalysis.
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SH···N and SH···P blue-shifting H-bonds and N···P interactions in complexes pairing HSN with amines and phosphines.
TL;DR: Quantum calculations at the MP2/aug-cc-pVDZ level examine complexes pairing HSN with aliphatic amines and phosphines with opposite partial charges on the N and P atoms, as well as covalent forces generated by charge transfer effects.
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Catalyst-Free, Atom-Economic, Multicomponent Polymerizations of Aromatic Diynes, Elemental Sulfur, and Aliphatic Diamines toward Luminescent Polythioamides
TL;DR: In this paper, the abundantly existed elemental sulfur as monomer was used to prepare polythioamide directly and efficiently through a facile multicomponent polymerization (MCP) of aromatic diynes, sulfur, and aliphatic diamines.
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Biomolecular Force Field Parameterization via Atoms-in-Molecule Electron Density Partitioning
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References
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Journal ArticleDOI
General atomic and molecular electronic structure system
Michael W. Schmidt,Kim K. Baldridge,Jerry A. Boatz,Steven T. Elbert,Mark S. Gordon,Jan H. Jensen,Shiro Koseki,Nikita Matsunaga,Kiet A. Nguyen,Shujun Su,Theresa L. Windus,Michel Dupuis,John A. Montgomery +12 more
TL;DR: A description of the ab initio quantum chemistry package GAMESS, which can be treated with wave functions ranging from the simplest closed‐shell case up to a general MCSCF case, permitting calculations at the necessary level of sophistication.
Journal ArticleDOI
Intermolecular interactions from a natural bond orbital, donor-acceptor viewpoint
Book
Atoms in molecules : a quantum theory
TL;DR: In this article, the quantum atom and the topology of the charge desnity of a quantum atom are discussed, as well as the mechanics of an atom in a molecule.
Journal ArticleDOI
Interactions with Aromatic Rings in Chemical and Biological Recognition
TL;DR: This review focuses mainly on examples with biological relevance since one of its aims it to enhance the knowledge of molecular recognition forces that is essential for drug development.