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Charleen Gaunitz
Researcher at University of Copenhagen
Publications - 12
Citations - 898
Charleen Gaunitz is an academic researcher from University of Copenhagen. The author has contributed to research in topics: Ancient DNA & Domestication. The author has an hindex of 7, co-authored 8 publications receiving 621 citations. Previous affiliations of Charleen Gaunitz include American Museum of Natural History.
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Journal ArticleDOI
Ancient genomes revisit the ancestry of domestic and Przewalski’s horses
Charleen Gaunitz,Antoine Fages,Antoine Fages,Kristian Hanghøj,Kristian Hanghøj,Anders Albrechtsen,Naveed Khan,Naveed Khan,Mikkel Schubert,Andaine Seguin-Orlando,Andaine Seguin-Orlando,Ivy J. Owens,Ivy J. Owens,Sabine Felkel,Olivier Bignon-Lau,Peter de Barros Damgaard,Alissa Mittnik,Azadeh Fatemeh Mohaseb,Azadeh Fatemeh Mohaseb,Hossein Davoudi,Hossein Davoudi,Saleh A. Alquraishi,Ahmed H. Alfarhan,Khaled A. S. Al-Rasheid,Eric Crubézy,Norbert Benecke,Sandra Olsen,Dorcas Brown,David W. Anthony,Ken Massy,Vladimir V. Pitulko,Aleksei Kasparov,Gottfried Brem,Michael Hofreiter,Gulmira Mukhtarova,Nurbol Baimukhanov,Lembi Lõugas,Vedat Onar,Philipp W. Stockhammer,Philipp W. Stockhammer,Johannes Krause,Bazartseren Boldgiv,Sainbileg Undrakhbold,Diimaajav Erdenebaatar,Sébastien Lepetz,Marjan Mashkour,Marjan Mashkour,Arne Ludwig,Barbara Wallner,Victor Merz,Ilja Merz,Viktor Zaibert,Eske Willerslev,Eske Willerslev,Eske Willerslev,Pablo Librado,Alan K. Outram,Ludovic Orlando,Ludovic Orlando +58 more
TL;DR: Data indicate that Przewalski’s horses are the feral descendants of horses herded at Botai and not truly wild horses, which indicates that a massive genomic turnover underpins the expansion of the horse stock that gave rise to modern domesticates, which coincides with large-scale human population expansions during the Early Bronze Age.
Journal ArticleDOI
Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series
Antoine Fages,Antoine Fages,Kristian Hanghøj,Kristian Hanghøj,Naveed Khan,Naveed Khan,Charleen Gaunitz,Andaine Seguin-Orlando,Andaine Seguin-Orlando,Michela Leonardi,Michela Leonardi,Christian McCrory Constantz,Christian McCrory Constantz,Cristina Gamba,Khaled A. S. Al-Rasheid,Silvia Albizuri,Ahmed H. Alfarhan,Morten E. Allentoft,Saleh A. Alquraishi,David W. Anthony,Nurbol Baimukhanov,James H. Barrett,Jamsranjav Bayarsaikhan,Norbert Benecke,Eloísa Bernáldez-Sánchez,Luis Berrocal-Rangel,Fereidoun Biglari,Sanne Boessenkool,Bazartseren Boldgiv,Gottfried Brem,Dorcas Brown,Joachim Burger,Eric Crubézy,Linas Daugnora,Hossein Davoudi,Peter Barros de Damgaard,María los Ángeles Chorro y de de de Villa-Ceballos,Sabine Deschler-Erb,Cleia Detry,Nadine Dill,Maria do Mar Oom,Anna Dohr,Sturla Ellingvåg,Diimaajav Erdenebaatar,Homa Fathi,Sabine Felkel,Carlos Fernández-Rodríguez,Esteban García-Viñas,Mietje Germonpré,José D. Granado,Jón Hallsteinn Hallsson,Helmut Hemmer,Michael Hofreiter,Aleksei Kasparov,Mutalib Khasanov,Roya Khazaeli,Pavel A. Kosintsev,Kristian Kristiansen,Tabaldiev Kubatbek,Lukas F. K. Kuderna,Pavel Kuznetsov,Haeedeh Laleh,Jennifer A. Leonard,Johanna Lhuillier,Corina Liesau von Lettow-Vorbeck,Andrey Logvin,Lembi Lõugas,Arne Ludwig,Arne Ludwig,Cristina Luís,Cristina Luís,Ana Margarida Arruda,Tomas Marques-Bonet,Raquel Matoso Silva,Victor Merz,Enkhbayar Mijiddorj,Bryan K. Miller,Oleg Monchalov,Fatemeh Azadeh Mohaseb,Fatemeh Azadeh Mohaseb,Arturo Morales,Ariadna Nieto-Espinet,Heidi Nistelberger,Vedat Onar,Albína Hulda Pálsdóttir,Albína Hulda Pálsdóttir,Vladimir V. Pitulko,Konstantin Pitskhelauri,Mélanie Pruvost,Petra Rajic Sikanjic,Anita Rapan Papeša,Natalia Roslyakova,Alireza Sardari,Eberhard Sauer,Renate Schafberg,Amelie Scheu,Jörg Schibler,Angela Schlumbaum,Nathalie Serrand,Aitor Serres-Armero,Beth Shapiro,Shiva Sheikhi Seno,Shiva Sheikhi Seno,Irina Shevnina,Sonia Shidrang,John Southon,Bastiaan Star,Naomi Sykes,Naomi Sykes,Kamal Taheri,William Timothy Treal Taylor,Wolf-Rüdiger Teegen,Tajana Trbojević Vukičević,Simon Trixl,Dashzeveg Tumen,Sainbileg Undrakhbold,Emma Usmanova,Ali A. Vahdati,Silvia Valenzuela-Lamas,Catarina Viegas,Barbara Wallner,Jaco Weinstock,Victor Zaibert,Benoît Clavel,Sébastien Lepetz,Marjan Mashkour,Marjan Mashkour,Agnar Helgason,Kari Stefansson,Eric Barrey,Eske Willerslev,Alan K. Outram,Pablo Librado,Pablo Librado,Ludovic Orlando,Ludovic Orlando +135 more
TL;DR: This extensive dataset allows us to assess the modern legacy of past equestrian civilizations and finds that two extinct horse lineages existed during early domestication, and the development of modern breeding impacted genetic diversity more dramatically than the previous millennia of human management.
Journal ArticleDOI
Ancient genomic changes associated with domestication of the horse
Pablo Librado,Cristina Gamba,Charleen Gaunitz,Clio Der Sarkissian,Mélanie Pruvost,Anders Albrechtsen,Antoine Fages,Antoine Fages,Naveed Khan,Naveed Khan,Mikkel Schubert,Vidhya Jagannathan,Aitor Serres-Armero,Lukas F. K. Kuderna,Inna S. Povolotskaya,Andaine Seguin-Orlando,Sébastien Lepetz,Markus Neuditschko,Catherine Thèves,Saleh A. Alquraishi,Ahmed H. Alfarhan,Khaled A. S. Al-Rasheid,Stefan Rieder,Zainolla Samashev,Henri-Paul Francfort,Norbert Benecke,Michael Hofreiter,Arne Ludwig,Christine Keyser,Christine Keyser,Tomas Marques-Bonet,Tomas Marques-Bonet,Bertrand Ludes,Bertrand Ludes,Eric Crubézy,Tosso Leeb,Eske Willerslev,Ludovic Orlando,Ludovic Orlando +38 more
TL;DR: Early domestication selection patterns supporting the neural crest hypothesis are found, which provides a unified developmental origin for common domestic traits and reveals that Iron Age Scythian steppe nomads implemented breeding strategies involving no detectable inbreeding and selection for coat-color variation and robust forelimbs.
Journal ArticleDOI
Comparing the performance of three ancient DNA extraction methods for high-throughput sequencing.
Cristina Gamba,Kristian Hanghøj,Charleen Gaunitz,Ahmed H. Alfarhan,Saleh A. Alquraishi,Khaled A. S. Al-Rasheid,Daniel G. Bradley,Ludovic Orlando,Ludovic Orlando +8 more
TL;DR: It is shown that methods based on the purification of DNA fragments using silica columns are more advantageous than in solution methods and provide a cost‐effective solution for downstream applications, including DNA sequencing on HTS platforms.
Journal ArticleDOI
Experimental conditions improving in-solution target enrichment for ancient DNA.
Diana I. Cruz-Dávalos,Diana I. Cruz-Dávalos,Bastien Llamas,Charleen Gaunitz,Antoine Fages,Antoine Fages,Cristina Gamba,Julien Soubrier,Pablo Librado,Andaine Seguin-Orlando,Mélanie Pruvost,Ahmed H. Alfarhan,Saleh A. Alquraishi,Khaled A. S. Al-Rasheid,Amelie Scheu,Amelie Scheu,Norbert Beneke,Arne Ludwig,Alan Cooper,Eske Willerslev,Ludovic Orlando,Ludovic Orlando +21 more
TL;DR: Experimental parameters that could impact the efficacy of MYbaits in‐solution capture assays of ~5000 nuclear loci or the whole genome are explored and it is found that varying quantities of the starting probes had only moderate effect on capture outcomes.