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Emily Gelfand
Researcher at Allen Institute for Brain Science
Publications - 9
Citations - 311
Emily Gelfand is an academic researcher from Allen Institute for Brain Science. The author has contributed to research in topics: Biology & Visual perception. The author has an hindex of 2, co-authored 4 publications receiving 133 citations.
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Journal ArticleDOI
Survey of spiking in the mouse visual system reveals functional hierarchy
Joshua H. Siegle,Xiaoxuan Jia,Séverine Durand,Sam Gale,Corbett Bennett,Nile Graddis,Greggory Heller,Tamina K. Ramirez,Hannah Choi,Hannah Choi,Jennifer Luviano,Peter A. Groblewski,Ruweida Ahmed,Anton Arkhipov,Amy Bernard,Yazan N. Billeh,Dillan Brown,Michael A. Buice,Nicolas Cain,Shiella Caldejon,Linzy Casal,Andrew Cho,Maggie Chvilicek,Timothy C. Cox,Kael Dai,Daniel J. Denman,Daniel J. Denman,Saskia E. J. de Vries,Roald Dietzman,Luke Esposito,Colin Farrell,David Feng,John Galbraith,Marina Garrett,Emily Gelfand,Nicole Hancock,Julie A. Harris,Robert Howard,Brian Hu,Ross Hytnen,Ramakrishnan Iyer,Erika Jessett,Katelyn Johnson,India Kato,Justin T. Kiggins,Sophie Lambert,Jérôme Lecoq,Peter Ledochowitsch,Jung Hoon Lee,Arielle Leon,Yang Li,Elizabeth Liang,Fuhui Long,Kyla Mace,Jose Melchior,Daniel Millman,Tyler Mollenkopf,Chelsea Nayan,Lydia Ng,Kiet Ngo,Thuyahn Nguyen,Philip R. Nicovich,Kat North,Gabriel Koch Ocker,Douglas R. Ollerenshaw,Michael Oliver,Marius Pachitariu,Jed Perkins,Melissa Reding,David Reid,Miranda Robertson,Kara Ronellenfitch,Sam Seid,Cliff Slaughterbeck,Michelle Stoecklin,David Sullivan,Ben Sutton,Jackie Swapp,Carol L. Thompson,Kristen Turner,Wayne Wakeman,Jennifer D. Whitesell,Derric Williams,Ali Williford,R.D. Young,Hongkui Zeng,Sarah A. Naylor,John W. Phillips,R. Clay Reid,Stefan Mihalas,Shawn R. Olsen,Christof Koch +91 more
TL;DR: In this paper, a large-scale dataset of tens of thousands of units in six cortical and two thalamic regions in the brains of mice responding to a battery of visual stimuli is presented.
Posted ContentDOI
A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas
Joshua H. Siegle,Xiaoxuan Jia,Séverine Durand,Samuel D. Gale,Corbett Bennett,Nile Graddis,Greggory Heller,Tamina K. Ramirez,Hannah Choi,Hannah Choi,Jennifer Luviano,Peter A. Groblewski,Ruweida Ahmed,Anton Arkhipov,Amy Bernard,Yazan N. Billeh,Brown D,Michael A. Buice,Nicholas Cain,Shiella Caldejon,Linzy Casal,Cho A,Chvilicek M,Timothy C. Cox,Kael Dai,Daniel J. Denman,Daniel J. Denman,de Vries Sej,Dietzman R,Luke Esposito,Colin Farrell,David Feng,John Galbraith,Marina Garrett,Emily Gelfand,Nicole Hancock,Julie A. Harris,Robert Howard,Brian Hu,Hytnen R,Ramakrishnan Iyer,Jessett E,Johnson K,India Kato,Justin T. Kiggins,Sophie Lambert,Jérôme Lecoq,Peter Ledochowitsch,Jung Hoon Lee,Arielle Leon,Yang Li,Liang E,Fuhui Long,Kyla Mace,Melchior J,Daniel Millman,Mollenkopf Ts,Chelsea Nayan,Lindsay Ng,Kiet Ngo,Thuyanh V. Nguyen,Philip R. Nicovich,Kat North,Gabriel Koch Ocker,Douglas R. Ollerenshaw,Michael Oliver,Marius Pachitariu,Jed Perkins,Melissa Reding,David Reid,Miranda Robertson,Kara Ronellenfitch,Sam Seid,Clifford R. Slaughterbeck,Michelle Stoecklin,David Sullivan,Sutton B,Jackie Swapp,Carol L. Thompson,Karly M. Turner,Wayne Wakeman,Jennifer D. Whitesell,Derric Williams,Ali Williford,R.D. Young,Hongkui Zeng,Sarah A. Naylor,John W. Phillips,Robert Reid,Stefan Mihalas,Olsen,Christof Koch +91 more
TL;DR: A large, open dataset that surveys spiking from units in six cortical and two thalamic regions responding to a battery of visual stimuli finds that inter-area functional connectivity mirrors the anatomical hierarchy from the Allen Mouse Brain Connectivity Atlas and provides a foundation for understanding coding and dynamics in the mouse cortico-thalamic visual system.
Posted ContentDOI
A whole-brain monosynaptic input connectome to neuron classes in mouse visual cortex
Shenqin Yao,Quanxin Wang,Karla E. Hirokawa,Benjamin Ouellette,Ruweida Ahmed,Jasmin Bomben,Krissy Brouner,Linzy Casal,Shiella Caldejon,Cho A,Nadezhda Dotson,Tanya L. Daigle,Tom Egdorf,Rachel Enstrom,Amanda Gary,Emily Gelfand,Melissa Gorham,Fiona Griffin,Hong Gu,Nicole Hancock,Robert Howard,Leonard Kuan,Sophie Lambert,Eric Lee,Jennifer Luviano,Kyla Mace,Michelle Maxwell,Marty Mortrud,Maitham Naeemi,Chelsea Nayan,Nhan-Kiet Ngo,Thuyanh V. Nguyen,Kat North,Shea Ransford,Augustin Ruiz,Sam Seid,Jackie Swapp,M. J. Taormina,Wayne Wakeman,Thomas Zhou,Philip R. Nicovich,Ali Williford,Lydia Potekhina,Medea McGraw,Lydia Ng,Peter A. Groblewski,Bosiljka Tasic,Stefan Mihalas,Julie A. Harris,Ali Cetin,Hongkui Zeng +50 more
TL;DR: This study expands the knowledge of the brain-wide inputs regulating visual areas and demonstrates that the improved rabies virus tracing strategy can be used to scale up the effort in dissecting connectivity of genetically defined cell populations in the whole mouse brain.
Posted ContentDOI
Comparative transcriptomics reveals human-specific cortical features
Nikolas L. Jorstad,Janet H.T. Song,David Exposito-Alonso,Hamsini Suresh,Nathan Castro,Fenna M. Krienen,Anna Marie Yanny,Jennie L. Close,Emily Gelfand,Kyle J. Travaglini,Soumyadeep Basu,Marc Beaudin,Darren Bertagnolli,Megan Crow,Songlin Ding,Jeroen Eggermont,Alexandra Glandon,Jeff Goldy,Thomas Kroes,Brian Long,Delissa McMillen,Trangthanh Pham,Christine Rimorin,Kimberly Siletti,Saroja Somasundaram,Michael Tieu,Amy Torkelson,Katelyn R. Ward,Guoping Feng,William D. Hopkins,Thomas Höllt,C. Dirk Keene,Sten Linnarsson,Steven A. McCarroll,Boudewijn P. F. Lelieveldt,Chet C. Sherwood,Kimberly A. Smith,Christopher A. Walsh,Alexander Dobin,Jesse Gillis,Ed S. Lein,Rebecca D. Hodge,Trygve E. Bakken +42 more
TL;DR: It is suggested that relatively few cellular and molecular changes uniquely define adult human cortical structure, particularly by affecting circuit connectivity and glial cell function.
Posted ContentDOI
Multiplane Mesoscope reveals distinct cortical interactions following expectation violations
Natalia Orlova,Dmitri A. Tsyboulski,Farzaneh Najafi,Sam Seid,Sara Kivikas,India Kato,Fiona Griffin,Arielle Leon,Quinn L’Heureux,Kat North,Jackie Swapp,Chelsea Nayan,Nicole Hancock,Ruweida Ahmed,Emily Gelfand,Andrew Cho,Kyla Mace,Robert Howard,Linzy Casal,Sophie Lambert,Eric Lee,Shiella Caldejon,Xana Waughman,Williford A,Marina Garrett,Douglas R. Ollerenshaw,Shawn R. Olsen,Peter A. Groblewski,Jérôme Lecoq,Peter Saggau,Peter Saggau,Peter Saggau +31 more
TL;DR: It is found that distinct cortical subnetworks represent expected and unexpected events, suggesting that expectation violations modify signal routing across cortical columns, and establishing the Multiplane Mesoscope as a unique platform to study signal routing.