J
Jeroen Raes
Researcher at Katholieke Universiteit Leuven
Publications - 293
Citations - 85097
Jeroen Raes is an academic researcher from Katholieke Universiteit Leuven. The author has contributed to research in topics: Microbiome & Medicine. The author has an hindex of 84, co-authored 240 publications receiving 66805 citations. Previous affiliations of Jeroen Raes include Flanders Institute for Biotechnology & Université catholique de Louvain.
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Journal ArticleDOI
Combined use of network inference tools identifies ecologically meaningful bacterial associations in a paddy soil
Honggui Wang,Zhong Wei,Lijuan Mei,Jingxin Gu,Suisui Yin,Karoline Faust,Karoline Faust,Jeroen Raes,Jeroen Raes,Ye Deng,Yulong Wang,Qirong Shen,Shixue Yin +12 more
TL;DR: This study highlights the potential utility of combined use of inference tools to identify ecologically meaningful bacterial associations in soils and other environmental samples and finds that highly linked nodes, which are often referred to as “keystone species” and are frequently interpreted as the species playing important roles in soils, are tool dependent.
Journal ArticleDOI
Gut microbiota affects sensitivity to acute DSS-induced colitis independently of host genotype.
Brigitta M. Brinkman,Anne A. M. J. Becker,Rene B. Ayiseh,Falk Hildebrand,Jeroen Raes,Geert Huys,Peter Vandenabeele +6 more
TL;DR: C cohousing experiments revealed that the colitogenic activity of the WT microbiota is transferable to Casp3/11−/− mice and that Prevotella species are likely to be involved and underscore the need for in-depth studies of the bilateral interaction of host genes and microbiota to gain insight into the mechanisms of disease pathogenesis.
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Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton.
Francisco M. Cornejo-Castillo,Ana María Cabello,Guillem Salazar,Patricia Sánchez-Baracaldo,Gipsi Lima-Mendez,Pascal Hingamp,Adriana Alberti,Shinichi Sunagawa,Peer Bork,Colomban de Vargas,Jeroen Raes,Chris Bowler,Patrick Wincker,Jonathan P. Zehr,Josep M. Gasol,Ramon Massana,Silvia G. Acinas +16 more
TL;DR: It is suggested that UCYN-A diversified in a co-evolutionary process, wherein their prymnesiophyte partners acted as a barrier driving an allopatric speciation of extant UCYN -A lineages.
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Microbial communities of the house fly Musca domestica vary with geographical location and habitat
Rahel Park,Maria C Dzialo,Stijn Spaepen,Donat Nsabimana,Kim Gielens,Herman Devriese,Sam Crauwels,Raul Y. Tito,Jeroen Raes,Bart Lievens,Kevin J. Verstrepen +10 more
TL;DR: The results suggest that vectoring of a wide spectrum of environmental microbes occurs principally through the external fly body surface, while the internal microbiome is likely more limited by fly physiology.
Journal ArticleDOI
Towards biome-specific analysis of meta-omics data.
TL;DR: The rise of meta-omics projects such as MetaHIT and the Human Microbiome Project and the Global Ocean Sampling Expedition aiming at unraveling the structure and function of specific microbiomes in different habitats was observed.