M
Monika Dabrowska
Researcher at Wellcome Trust Sanger Institute
Publications - 12
Citations - 695
Monika Dabrowska is an academic researcher from Wellcome Trust Sanger Institute. The author has contributed to research in topics: Biology & Wnt signaling pathway. The author has an hindex of 4, co-authored 8 publications receiving 190 citations.
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Journal ArticleDOI
scRNA-seq assessment of the human lung, spleen, and esophagus tissue stability after cold preservation
Elo Madissoon,Elo Madissoon,Anna Wilbrey-Clark,Ricardo J. Miragaia,Kourosh Saeb-Parsy,Krishnaa T. Mahbubani,Nikitas Georgakopoulos,Philippa Harding,Krzysztof Polanski,Ni Huang,Karol Nowicki-Osuch,Rebecca C. Fitzgerald,Kevin W. Loudon,John R. Ferdinand,Menna R. Clatworthy,A. Tsingene,S. van Dongen,Monika Dabrowska,Minal Patel,Michael J. T. Stubbington,Sarah A. Teichmann,Oliver Stegle,Kerstin B. Meyer +22 more
TL;DR: In this article, the effect of cold storage on fresh healthy spleen, esophagus, and lung from ≥ 5 donors over 72h was assessed, and robust protocols for tissue preservation for up to 24h prior to scRNA-seq analysis were presented.
Journal ArticleDOI
Cells of the human intestinal tract mapped across space and time.
Rasa Elmentaite,Natsuhiko Kumasaka,Kenny Roberts,Aaron M. Fleming,Emma Dann,Hamish W King,Vitalii Kleshchevnikov,Monika Dabrowska,Sophie Pritchard,Liam Bolt,Sara F. Vieira,Lira Mamanova,Ni Huang,Francesca Perrone,Issac Goh Kai’En,Steven Lisgo,Matilda Katan,Steven Leonard,Thomas R. W. Oliver,Thomas R. W. Oliver,C. Elizabeth Hook,Komal Nayak,Lia S. Campos,Cecilia Domínguez Conde,Emily Stephenson,Justin Engelbert,Rachel A. Botting,Krzysztof Polanski,Stijn van Dongen,Minal Patel,Michael D Morgan,Michael D Morgan,John C. Marioni,John C. Marioni,John C. Marioni,Omer Ali Bayraktar,Kerstin B Meyer,Xiaoling He,Roger A. Barker,Holm H. Uhlig,Holm H. Uhlig,Krishnaa T. Mahbubani,Kourosh Saeb-Parsy,Matthias Zilbauer,Menna R. Clatworthy,Menna R. Clatworthy,Muzlifah Haniffa,Muzlifah Haniffa,Kylie R. James,Kylie R. James,Sarah A. Teichmann,Sarah A. Teichmann +51 more
TL;DR: The cellular landscape of the human intestinal tract is dynamic throughout life, developing in utero and changing in response to functional requirements and environmental exposures as discussed by the authors, using single-cell RNA sequencing and antigen receptor analysis of almost half a million cells from up to 5 anatomical regions of the developing and up to 11 distinct anatomical regions in the healthy human gut.
Journal ArticleDOI
Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro.
Luz Garcia-Alonso,Louis-François Handfield,Kenny Roberts,Konstantina Nikolakopoulou,Konstantina Nikolakopoulou,Ridma C. Fernando,Ridma C. Fernando,Lucy Gardner,Benjamin Woodhams,Benjamin Woodhams,Anna Arutyunyan,Anna Arutyunyan,Krzysztof Polanski,Regina Hoo,Regina Hoo,Carmen Sancho-Serra,Tong Li,Kwasi Kwakwa,Elizabeth Tuck,Valentina Lorenzi,Hassan Massalha,Hassan Massalha,Martin Prete,Vitalii Kleshchevnikov,Aleksandra Tarkowska,Tarryn Porter,Cecilia Icoresi Mazzeo,Stijn van Dongen,Monika Dabrowska,Vasyl Vaskivskyi,Krishnaa T. Mahbubani,Jong-Eun Park,Mercedes Jimenez-Linan,Lia S. Campos,Vladimir Yu. Kiselev,Cecilia Lindskog,Paul Ayuk,Elena Prigmore,Michael R. Stratton,Kourosh Saeb-Parsy,Ashley Moffett,Luiza Moore,Luiza Moore,Omer Ali Bayraktar,Sarah A. Teichmann,Sarah A. Teichmann,Margherita Y. Turco,Margherita Y. Turco,Roser Vento-Tormo,Roser Vento-Tormo +49 more
TL;DR: In this paper, the authors dissect the signaling pathways that determine cell fate of the epithelial lineages in the lumenal and glandular microenvironments of the endometrium.
Posted ContentDOI
A spatial multi-omics atlas of the human lung reveals a novel immune cell survival niche
Elo Madissoon,Elo Madissoon,Amanda Oliver,Vitalii Kleshchevnikov,Anna Wilbrey-Clark,Krzysztof Polanski,Ana Ribeiro Orsi,Ana Ribeiro Orsi,Lira Mamanova,Liam Bolt,Nathan Richoz,Rasa Elmentaite,J. Patrick Pett,Ni Huang,Peng He,Monika Dabrowska,Sophie Pritchard,Liz Tuck,Elena Prigmore,Andrew J Knights,Agnes Oszlanczi,Adam Hunter,Sara F. Vieira,Minal Patel,Nikitas Georgakopoulos,Krishnaa T. Mahbubani,Kourosh Saeb-Parsy,Menna R. Clatworthy,Menna R. Clatworthy,Omer Ali Bayraktar,Oliver Stegle,Oliver Stegle,Natsuhiko Kumasaka,Sarah A. Teichmann,Sarah A. Teichmann,Kerstin B. Meyer +35 more
TL;DR: In this article, a multi-omics spatial lung atlas is presented to define additional heterogeneity and novel cell types which are mapped back into the macro-and micro-anatomical tissue context to define functional tissue microenvironments.
Posted ContentDOI
Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro
Luz Garcia-Alonso,Louis-François Handfield,Kenny Roberts,Konstantina Nikolakopoulou,Ridma C. Fernando,Lucy Gardner,Ben Woodhams,Anna Arutyunyan,Anna Arutyunyan,Krzysztof Polanski,Regina Hoo,Regina Hoo,Carmen Sancho-Serra,Tong Li,Kwasi Kwakwa,Elizabeth Tuck,Vitalii Kleshchevnikov,Aleksandra Tarkowska,Tarryn Porter,Cecilia Icoresi Mazzeo,Stijn van Dongen,Monika Dabrowska,Vasyl Vaskivskyi,Krishna T. Mahbubani,Jong-Eun Park,Mercedes Jimenez-Linan,Lia S. Campos,Vladimir Yu. Kiselev,Cecilia Lindskog,Paul Ayuk,Elena Prigmore,Michael R. Stratton,Kourosh Saeb-Parsy,Ashley Moffett,Luiza Moore,Luiza Moore,Omer Ali Bayraktar,Sarah A. Teichmann,Sarah A. Teichmann,Margherita Y. Turco,Roser Vento-Tormo,Roser Vento-Tormo +41 more
TL;DR: In this paper, the authors dissect the signalling pathways that determine cell fate of the epithelial lineages in the lumenal and glandular microenvironments of the endometrium and show that downregulation of WNT or NOTCH pathways increases the differentiation efficiency along the secretory and ciliated lineages, respectively.