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Nikos C. Kyrpides
Researcher at Joint Genome Institute
Publications - 735
Citations - 73233
Nikos C. Kyrpides is an academic researcher from Joint Genome Institute. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 96, co-authored 711 publications receiving 62360 citations. Previous affiliations of Nikos C. Kyrpides include University of Crete & Oak Ridge National Laboratory.
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Journal ArticleDOI
Meeting Report: Towards a Critical Assessment of Functional Annotation Experiment (CAFAE) for bacterial genome annotation.
Owen White,Nikos C. Kyrpides +1 more
TL;DR: A team of roughly fifty people met to define and scope the possibility of a first Critical Assessment of Functional Annotation Experiment (CAFAE) for bacterial genome annotation in Crystal City, Virginia.
Posted ContentDOI
Impact of soil salinity on the cowpea nodule-microbiome and the isolation of halotolerant PGPR strains to promote plant growth under salinity stress
Salma Mukhtar,Ann M. Hirsch,Noor Ullah Khan,Kauser A. Malik,Ethan A. Humm,Matteo Pellegrini,Baochen Shi,Leah Briscoe,Marcel Huntemann,Alicia Clum,Brian Foster,Bryce Foster,Simon Roux,Krishnaveni Palaniappan,Neha Varghese,Supratim Mukherjee,T. B. K. Reddy,Chris Daum,Alex Copeland,Natalia Ivanova,Nikos C. Kyrpides,Nicole Shapiro,Emiley A. Eloe-Fadrosh,Maskit Maymon,Muhammad Sajjad Mirza,Samina Mehnaz +25 more
TL;DR: Sequencing analysis of eDNA isolated from cowpea nodules established by the trap plants grown in the four Pakistan soils indicated that the nodule microbiome consisted almost exclusively of Proteobacterial sequences, particularly Bradyrhizobium.
Journal ArticleDOI
High-quality permanent draft genome sequence of the extremely osmotolerant diphenol degrading bacterium Halotalea alkalilenta AW-7(T), and emended description of the genus Halotalea.
Spyridon Ntougias,Alla Lapidus,Alla Lapidus,Alex Copeland,T. B. K. Reddy,Amrita Pati,Natalia Ivanova,Victor Markowitz,Hans-Peter Klenk,Tanja Woyke,Constantinos Fasseas,Nikos C. Kyrpides,Nikos C. Kyrpides,Georgios I. Zervakis +13 more
TL;DR: Members of the genus Halotalea are of high significance since they can tolerate the greatest glucose and maltose concentrations ever reported for known bacteria and are involved in the degradation of industrial effluents and it possesses the genetic ability to detoxify fluoroacetate, cyanate and acrylonitrile.
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Draft Genome Sequences of New Isolates and the Known Species of the Family Microbacteriaceae Associated with Plants.
O. V. Vasilenko,Irina P. Starodumova,Lubov V. Dorofeeva,Sergey V. Tarlachkov,Natalia V. Prisyazhnaya,Vladimir N. Chizhov,Sergei A. Subbotin,Marcel Huntemann,Alicia Clum,Kecia Duffy,Manoj Pillay,Krishnaveni Palaniappan,Neha Varghese,I-Min A. Chen,Dimitrios Stamatis,T. B. K. Reddy,Ronan C. O'Malley,Chris Daum,Nicole Shapiro,Natalia Ivanova,Nikos C. Kyrpides,Tanja Woyke,William B. Whitman,Lyudmila I. Evtushenko +23 more
TL;DR: These genomic data will be useful for natural taxonomy and comparative genomic studies of bacterial strains of the family Microbacteriaceae.
Journal ArticleDOI
Genome Sequences of Actinobacteria from Extreme Environments in Colombia.
Angela Cantillo,Nicole Shapiro,Tanja Woyke,Nikos C. Kyrpides,Sandra Baena,María Mercedes Zambrano +5 more
TL;DR: Six actinobacterial genomes isolated from a salt mine and from soil in a high-mountain Páramo ecosystem were sequenced due to their antimicrobial and cytotoxic activities.