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Nikos C. Kyrpides
Researcher at Joint Genome Institute
Publications - 735
Citations - 73233
Nikos C. Kyrpides is an academic researcher from Joint Genome Institute. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 96, co-authored 711 publications receiving 62360 citations. Previous affiliations of Nikos C. Kyrpides include University of Crete & Oak Ridge National Laboratory.
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Journal ArticleDOI
Improved Draft Genome Sequence of Pseudomonas poae A2-S9, a Strain with Plant Growth-Promoting Activity.
Ye Xia,Seth DeBolt,Qin Ma,Adam McDermaid,Cankun Wang,Nicole Shapiro,Tanja Woyke,Nikos C. Kyrpides +7 more
TL;DR: The improved draft genome sequence of Pseudomonas poae strain A2-S9, a bacterium that was originally isolated from switchgrass plants and exhibited the capacity for plant growth promotion, is reported here.
Journal ArticleDOI
Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)
Hans-Peter Klenk,Megan Lu,Susan Lucas,Alla Lapidus,Alex Copeland,Sam Pitluck,Lynne Goodwin,Lynne Goodwin,Cliff Han,Cliff Han,Roxanne Tapia,Roxanne Tapia,Evelyne-Marie Brambilla,Gabriele Pötter,Miriam Land,Miriam Land,Natalia Ivanova,Manfred Rohde,Markus Göker,John C. Detter,John C. Detter,Wen-Jun Li,Nikos C. Kyrpides,Tanja Woyke +23 more
TL;DR: The features of this organism are described, together with the complete genome sequence (permanent draft status), and annotation, and this organism was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).
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High-quality draft genome sequence of Sedimenticola selenatireducens strain AK4OH1T, a gammaproteobacterium isolated from estuarine sediment
Tiffany S. Louie,Donato Giovannelli,Donato Giovannelli,Donato Giovannelli,Nathan Yee,Priya Narasingarao,Valentin Starovoytov,Markus Göker,Hans-Peter Klenk,Hans-Peter Klenk,Elke Lang,Nikos C. Kyrpides,Nikos C. Kyrpides,Tanja Woyke,Elisabetta Bini,Elisabetta Bini,Max M. Häggblom +16 more
TL;DR: The draft genome of S. selenatireducens strain AK4OH1T comprises 4,588,530 bp and 4276 predicted protein-coding genes including genes for the anaerobic degradation of 4-hydroxybenzoate and benzoate.
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Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.
Krishna Palaniappan,Jan P. Meier-Kolthoff,Hazuki Teshima,Hazuki Teshima,Matt Nolan,Alla Lapidus,Alla Lapidus,Hope Tice,Tijana Glavina del Rio,Jan Fang Cheng,Cliff Han,Cliff Han,Roxanne Tapia,Roxanne Tapia,Lynne Goodwin,Lynne Goodwin,Sam Pitluck,Konstantinos Liolios,Konstantinos Mavromatis,Ioanna Pagani,Natalia Ivanova,Natalia Mikhailova,Amrita Pati,Amy Chen,Manfred Rohde,Shanmugam Mayilraj,Stefan Spring,John C. Detter,John C. Detter,Markus Göker,James Bristow,Jonathan A. Eisen,Jonathan A. Eisen,Victor Markowitz,Philip Hugenholtz,Philip Hugenholtz,Nikos C. Kyrpides,Hans-Peter Klenk,Tanja Woyke +38 more
TL;DR: The features of this organism are described together with the non-contiguous genome sequence and annotation and the 1,880,838 bp long chromosome with its 1,751 protein-coding and 59 RNA genes is a part of the GenomicEncyclopedia of bacteria andArchaea project.
Journal ArticleDOI
Draft genome sequence of Actinotignum schaalii DSM 15541T: Genetic insights into the lifestyle, cell fitness and virulence.
Atteyet F. Yassin,Stefan Langenberg,Marcel Huntemann,Alicia Clum,Manoj Pillay,Krishnaveni Palaniappan,Neha Varghese,Natalia Mikhailova,Supratim Mukherjee,T. B. K. Reddy,Chris Daum,Nicole Shapiro,Natalia Ivanova,Tanja Woyke,Nikos C. Kyrpides +14 more
TL;DR: Resistance to ciprofloxacin occurs by mutation in chromosomal genes that encode the subunits of DNA-gyrase and topisomerase IV (ParC) enzymes, while resistant to metronidazole was due to the frxA gene, which encodes NADPH-flavin oxidoreductase.