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Nikos C. Kyrpides
Researcher at Joint Genome Institute
Publications - 735
Citations - 73233
Nikos C. Kyrpides is an academic researcher from Joint Genome Institute. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 96, co-authored 711 publications receiving 62360 citations. Previous affiliations of Nikos C. Kyrpides include University of Crete & Oak Ridge National Laboratory.
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Complete genome sequence of Nakamurella multipartita type strain (Y-104T)
Hope Tice,Shanmugam Mayilraj,David Sims,Alla Lapidus,Matt Nolan,Susan Lucas,Tijana Glavina del Rio,Alex Copeland,Jan Fang Cheng,Linda Meincke,David Bruce,David Bruce,Lynne Goodwin,Lynne Goodwin,Sam Pitluck,Natalia Ivanova,Konstantinos Mavromatis,Galina Ovchinnikova,Amrita Pati,Amy Chen,Krishna Palaniappan,Miriam Land,Miriam Land,Loren Hauser,Loren Hauser,Yun Juan Chang,Yun Juan Chang,Cynthia D. Jeffries,Cynthia D. Jeffries,John C. Detter,John C. Detter,Thomas Brettin,Thomas Brettin,Manfred Rohde,Markus Göker,James Bristow,Jonathan A. Eisen,Jonathan A. Eisen,Victor Markowitz,Philip Hugenholtz,Nikos C. Kyrpides,Hans-Peter Klenk,Feng Chen +42 more
TL;DR: This is the first complete genome sequence of a member of the family Nakamurellaceae and the 6,060,298 bp long single replicon genome with its 5415 protein-coding and 56 RNA genes is part of the GenomicEncyclopedia of bacteria andArchaea project.
Journal ArticleDOI
Complete genome sequence of Haloterrigena turkmenica type strain (4k T )
Elizabeth Saunders,Elizabeth Saunders,Brian J. Tindall,Regine Fähnrich,Alla Lapidus,Alex Copeland,Tijana Glavina del Rio,Susan Lucas,Feng Chen,Hope Tice,Jan Fang Cheng,Cliff Han,Cliff Han,John C. Detter,John C. Detter,David Bruce,David Bruce,Lynne Goodwin,Lynne Goodwin,Patrick S. G. Chain,Patrick S. G. Chain,Sam Pitluck,Amrita Pati,Natalia Ivanova,Konstantinos Mavromatis,Amy Chen,Krishna Palaniappan,Miriam Land,Miriam Land,Loren Hauser,Loren Hauser,Yun Juan Chang,Yun Juan Chang,Cynthia D. Jeffries,Cynthia D. Jeffries,Thomas Brettin,Thomas Brettin,Manfred Rohde,Markus Göker,James Bristow,Jonathan A. Eisen,Jonathan A. Eisen,Victor Markowitz,Philip Hugenholtz,Hans-Peter Klenk,Nikos C. Kyrpides +45 more
TL;DR: Haloterrigena turkmenica, was isolated from sulfate saline soil in Turkmenistan, is a relatively fast growing, chemoorganotrophic, carotenoid-containing, extreme halophile, requiring at least 2 M NaCl for growth.
Journal ArticleDOI
Complete genome sequence of Desulfarculus baarsii type strain (2st14T)
Hui Sun,Stefan Spring,Alla Lapidus,Karen W. Davenport,Karen W. Davenport,Tijana Glavina del Rio,Hope Tice,Matt Nolan,Alex Copeland,Jan Fang Cheng,Susan Lucas,Roxanne Tapia,Roxanne Tapia,Lynne Goodwin,Lynne Goodwin,Sam Pitluck,Natalia Ivanova,Ionna Pagani,Konstantinos Mavromatis,Galina Ovchinnikova,Amrita Pati,Amy Chen,Krishna Palaniappan,Loren Hauser,Loren Hauser,Yun Juan Chang,Yun Juan Chang,Cynthia D. Jeffries,Cynthia D. Jeffries,John C. Detter,John C. Detter,Cliff Han,Cliff Han,Manfred Rohde,Evelyne Brambilla,Markus Göker,Tanja Woyke,James Bristow,Jonathan A. Eisen,Jonathan A. Eisen,Victor Markowitz,Philip Hugenholtz,Nikos C. Kyrpides,Hans-Peter Klenk,Miriam Land,Miriam Land +45 more
TL;DR: This species is a mesophilic sulfate-reducing bacterium with the capability to oxidize acetate and fatty acids of up to 18 carbon atoms completely to CO2 and the acetyl-CoA/CODH pathway is used by this species for the complete oxidation of carbon sources and autotrophic growth on formate.
Journal ArticleDOI
Complete genome sequence of Desulfomicrobium baculatum type strain (XT)
Alex Copeland,Stefan Spring,Markus Göker,Susanne Schneider,Alla Lapidus,Tijana Glavina del Rio,Hope Tice,Jan Fang Cheng,Susan Lucas,Feng Chen,Matt Nolan,David Bruce,David Bruce,Lynne Goodwin,Lynne Goodwin,Sam Pitluck,Natalia Ivanova,Konstantinos Mavromatis,Galina Ovchinnikova,Amrita Pati,Amy Chen,Krishna Palaniappan,Miriam Land,Miriam Land,Loren Hauser,Loren Hauser,Yun Juan Chang,Yun Juan Chang,Cynthia C. Jeffries,Cynthia C. Jeffries,Linda Meincke,David Sims,Thomas Brettin,Thomas Brettin,John C. Detter,John C. Detter,Cliff Han,Cliff Han,Patrick S. G. Chain,Patrick S. G. Chain,James Bristow,Jonathan A. Eisen,Jonathan A. Eisen,Victor Markowitz,Philip Hugenholtz,Nikos C. Kyrpides,Hans-Peter Klenk +46 more
TL;DR: This is the first completed genome sequence of a member of the deltaproteobacterial family Desulfomicrobiaceae, and this 3,942,657 bp long single replicon genome with its 3494 protein-coding and 72 RNA genes is part of the GenomicEncyclopedia ofBacteria andArchaea project.
Journal ArticleDOI
Genome-Scale Data Call for a Taxonomic Rearrangement of Geodermatophilaceae.
Maria del Carmen Montero-Calasanz,Maria del Carmen Montero-Calasanz,Jan P. Meier-Kolthoff,Dao-Feng Zhang,Adnan Yaramis,Adnan Yaramis,Manfred Rohde,Tanja Woyke,Nikos C. Kyrpides,Peter Schumann,Wen-Jun Li,Markus Göker +11 more
TL;DR: A phylogenetic analysis of the genome sequences now available for the type strains of Geodermatophilaceae and re-analyzed the previously assembled phenotypic data indicated that the largest genus, GeoderMatophilus, is not monophyletic, hence the arrangement of the genera of Geodmatophilus must be reconsidered.