Y
Yi Ren
Researcher at Peking University
Publications - 38
Citations - 3941
Yi Ren is an academic researcher from Peking University. The author has contributed to research in topics: Citrullus lanatus & Ripening. The author has an hindex of 18, co-authored 30 publications receiving 3056 citations.
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Journal ArticleDOI
The genome of the cucumber, Cucumis sativus L.
Sanwen Huang,Ruiqiang Li,Zhonghua Zhang,Li Li,Xingfang Gu,Wei Fan,William J. Lucas,Xiaowu Wang,Bingyan Xie,Peixiang Ni,Yuanyuan Ren,Hongmei Zhu,Jun Li,Kui Lin,Weiwei Jin,Zhangjun Fei,Guangcun Li,Jack E. Staub,Andrzej Kilian,Edwin A. G. van der Vossen,Yang Wu,Jie Guo,Jun He,Zhiqi Jia,Yi Ren,Geng Tian,Yao Lu,Jue Ruan,Wubin Qian,Mingwei Wang,Quanfei Huang,Bo Li,Zhaoling Xuan,Jianjun Cao,Asan,Zhigang Wu,Juanbin Zhang,Qingle Cai,Yinqi Bai,Bowen Zhao,Yonghua Han,Ying Li,Xuefeng Li,Shenhao Wang,Qiuxiang Shi,Shiqiang Liu,Won Kyong Cho,Jae-Yean Kim,Yong Xu,Katarzyna Heller-Uszynska,Han Miao,Zhouchao Cheng,Shengping Zhang,Jian Wu,Yuhong Yang,Houxiang Kang,Man Li,Huiqing Liang,Xiaoli Ren,Zhongbin Shi,Ming Wen,Min Jian,Hailong Yang,Guojie Zhang,Zhentao Yang,Rui Chen,Shifang Liu,Jianwen Li,Lijia Ma,Hui Liu,Yan Zhou,Jing Zhao,Xiaodong Fang,Guoqing Li,Lin Fang,Yingrui Li,Dongyuan Liu,Hongkun Zheng,Yong Zhang,Nan Qin,Zhuo Li,Guohua Yang,Shuang Yang,Lars Bolund,Karsten Kristiansen,Hancheng Zheng,Shaochuan Li,Xiuqing Zhang,Huanming Yang,Jing Wang,Rifei Sun,Zhang Baoxi,Shuzhi Jiang,Jun Wang,Yongchen Du,Songgang Li +95 more
TL;DR: This study establishes that five of the cucumber's seven chromosomes arose from fusions of ten ancestral chromosomes after divergence from Cucumis melo, and identifies 686 gene clusters related to phloem function.
Journal ArticleDOI
The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions
Shaogui Guo,Shaogui Guo,Jianguo Zhang,Jianguo Zhang,Honghe Sun,Honghe Sun,Jérôme Salse,William J. Lucas,Haiying Zhang,Yi Zheng,Linyong Mao,Yi Ren,Zhiwen Wang,Jiumeng Min,Xiaosen Guo,Florent Murat,Byung-Kook Ham,Zhaoliang Zhang,Shan Gao,Mingyun Huang,Yimin Xu,Silin Zhong,Aureliano Bombarely,Lukas A. Mueller,Hong Zhao,Hongju He,Yan Zhang,Zhonghua Zhang,Sanwen Huang,Tao Tan,Erli Pang,Kui Lin,Qun Hu,Hanhui Kuang,Peixiang Ni,Peixiang Ni,Bo Wang,Jingan Liu,Qinghe Kou,Wenju Hou,Xiaohua Zou,Jiao Jiang,Guoyi Gong,Kathrin Klee,Heiko Schoof,Ying Huang,Xuesong Hu,Shanshan Dong,Dequan Liang,Juan Wang,Kui Wu,Yang Xia,Xiang Zhao,Zequn Zheng,Miao Xing,Xinming Liang,Bangqing Huang,Tian Lv,Junyi Wang,Ye Yin,Hongping Yi,Ruiqiang Li,Mingzhu Wu,Amnon Levi,Xingping Zhang,James J. Giovannoni,James J. Giovannoni,Jun Wang,Jun Wang,Yunfu Li,Zhangjun Fei,Zhangjun Fei,Yong Xu +72 more
TL;DR: A high-quality draft genome sequence of the east Asia watermelon cultivar 97103 containing 23,440 predicted protein-coding genes is reported, which yielded important insights into aspects of phloem-based vascular signaling in common between watermelon and cucumber and identified genes crucial to valuable fruit-quality traits.
Journal ArticleDOI
An Integrated Genetic and Cytogenetic Map of the Cucumber Genome
Yi Ren,Zhonghua Zhang,Jinhua Liu,Jack E. Staub,Yonghua Han,Zhouchao Cheng,Xuefeng Li,Jingyuan Lu,Han Miao,Houxiang Kang,Bingyan Xie,Xingfang Gu,Xiaowu Wang,Yongchen Du,Weiwei Jin,Sanwen Huang +15 more
TL;DR: The development of highly polymorphic simple sequence repeat (SSR) markers originated from whole genome shotgun sequencing and the subsequent construction of a high-density genetic linkage map will facilitate whole genome sequencing, positional cloning, and molecular breeding in cucumber, and enable the integration of knowledge of gene and trait in cucurbits.
Journal ArticleDOI
Efficient CRISPR/Cas9-based gene knockout in watermelon
Shouwei Tian,Linjian Jiang,Qiang Gao,Jie Zhang,Mei Zong,Haiying Zhang,Yi Ren,Shaogui Guo,Guoyi Gong,Fan Liu,Yong Xu +10 more
TL;DR: The results show that CRISPR/Cas9 system is a powerful tool to effectively create knockout mutations in watermelon, and has technically 100% of genome editing efficiency in transgenic watermelon lines.
Journal ArticleDOI
Karyotype Stability and Unbiased Fractionation in the Paleo-Allotetraploid Cucurbita Genomes.
Honghe Sun,Shan Wu,Zhang Guoyu,Chen Jiao,Shaogui Guo,Yi Ren,Jie Zhang,Haiying Zhang,Guoyi Gong,Zhangcai Jia,Zhang Fan,Jiaxing Tian,William J. Lucas,Jeff J. Doyle,Li Haizhen,Zhangjun Fei,Zhangjun Fei,Yong Xu +17 more
TL;DR: High-quality genome sequences of C. maxima and C. moschata are reported and evidence supporting an allotetraploidization event in Cucurbita is provided and insights into polyploid genome evolution and valuable resources for genetic improvement of cucurbit crops are provided.