S
Shuang Yang
Researcher at Kunming Institute of Zoology
Publications - 24
Citations - 6771
Shuang Yang is an academic researcher from Kunming Institute of Zoology. The author has contributed to research in topics: Genome & Chemistry. The author has an hindex of 13, co-authored 16 publications receiving 5972 citations. Previous affiliations of Shuang Yang include Beijing Genomics Institute & Beijing Institute of Genomics.
Papers
More filters
Journal ArticleDOI
Genome sequence and analysis of the tuber crop potato.
Xun Xu,Shengkai Pan,Shifeng Cheng,Bo Zhang,Mu D,Peixiang Ni,Gengyun Zhang,Shuang Yang,Ruiqiang Li,Jun Wang,Gisella Orjeda,Frank Guzman,Torres M,Roberto Lozano,Olga Ponce,Diana Martinez,De la Cruz G,Chakrabarti Sk,Patil Vu,Konstantin G. Skryabin,Boris B. Kuznetsov,Nikolai V. Ravin,Tatjana V. Kolganova,Alexey V. Beletsky,Andrey V. Mardanov,Di Genova A,Dan Bolser,David M. A. Martin,Li G,Yang Y,Hanhui Kuang,Hu Q,Xiong X,Gerard J. Bishop,Boris Sagredo,Nilo Mejía,Zagorski W,Robert Gromadka,Jan Gawor,Pawel Szczesny,Sanwen Huang,Zhang Z,Liang C,He J,Li Y,He Y,Xu J,Youjun Zhang,Xie B,Du Y,Qu D,Merideth Bonierbale,Marc Ghislain,Herrera Mdel R,Giovanni Giuliano,Marco Pietrella,Gaetano Perrotta,Paolo Facella,O'Brien K,Sergio Enrique Feingold,Barreiro Le,Massa Ga,Luis Aníbal Diambra,Brett R Whitty,Brieanne Vaillancourt,Lin H,Alicia N. Massa,Geoffroy M,Lundback S,Dean DellaPenna,Buell Cr,Sanjeev Kumar Sharma,David Marshall,Robbie Waugh,Glenn J. Bryan,Destefanis M,Istvan Nagy,Dan Milbourne,Susan Thomson,Mark Fiers,Jeanne M. E. Jacobs,Kåre Lehmann Nielsen,Mads Sønderkær,Marina Iovene,Giovana Augusta Torres,Jiming Jiang,Richard E. Veilleux,Christian W. B. Bachem,de Boer J,Theo Borm,Bjorn Kloosterman,van Eck H,Erwin Datema,Hekkert Bt,Aska Goverse,van Ham Rc,Richard G. F. Visser +96 more
TL;DR: The potato genome sequence provides a platform for genetic improvement of this vital crop and predicts 39,031 protein-coding genes and presents evidence for at least two genome duplication events indicative of a palaeopolyploid origin.
Journal ArticleDOI
The genome of the cucumber, Cucumis sativus L.
Sanwen Huang,Ruiqiang Li,Zhonghua Zhang,Li Li,Xingfang Gu,Wei Fan,William J. Lucas,Xiaowu Wang,Bingyan Xie,Peixiang Ni,Yuanyuan Ren,Hongmei Zhu,Jun Li,Kui Lin,Weiwei Jin,Zhangjun Fei,Guangcun Li,Jack E. Staub,Andrzej Kilian,Edwin A. G. van der Vossen,Yang Wu,Jie Guo,Jun He,Zhiqi Jia,Yi Ren,Geng Tian,Yao Lu,Jue Ruan,Wubin Qian,Mingwei Wang,Quanfei Huang,Bo Li,Zhaoling Xuan,Jianjun Cao,Asan,Zhigang Wu,Juanbin Zhang,Qingle Cai,Yinqi Bai,Bowen Zhao,Yonghua Han,Ying Li,Xuefeng Li,Shenhao Wang,Qiuxiang Shi,Shiqiang Liu,Won Kyong Cho,Jae-Yean Kim,Yong Xu,Katarzyna Heller-Uszynska,Han Miao,Zhouchao Cheng,Shengping Zhang,Jian Wu,Yuhong Yang,Houxiang Kang,Man Li,Huiqing Liang,Xiaoli Ren,Zhongbin Shi,Ming Wen,Min Jian,Hailong Yang,Guojie Zhang,Zhentao Yang,Rui Chen,Shifang Liu,Jianwen Li,Lijia Ma,Hui Liu,Yan Zhou,Jing Zhao,Xiaodong Fang,Guoqing Li,Lin Fang,Yingrui Li,Dongyuan Liu,Hongkun Zheng,Yong Zhang,Nan Qin,Zhuo Li,Guohua Yang,Shuang Yang,Lars Bolund,Karsten Kristiansen,Hancheng Zheng,Shaochuan Li,Xiuqing Zhang,Huanming Yang,Jing Wang,Rifei Sun,Zhang Baoxi,Shuzhi Jiang,Jun Wang,Yongchen Du,Songgang Li +95 more
TL;DR: This study establishes that five of the cucumber's seven chromosomes arose from fusions of ten ancestral chromosomes after divergence from Cucumis melo, and identifies 686 gene clusters related to phloem function.
Journal ArticleDOI
The diploid genome sequence of an Asian individual.
Jun Wang,Wei Wang,Ruiqiang Li,Ruiqiang Li,Yingrui Li,Yingrui Li,Yingrui Li,Geng Tian,Geng Tian,Laurie Goodman,Wei Fan,Junqing Zhang,Jun Li,Juanbin Zhang,Yiran Guo,Yiran Guo,Binxiao Feng,Heng Li,Heng Li,Yao Lu,Xiaodong Fang,Huiqing Liang,Zhenglin Du,Dong Li,Yiqing Zhao,Yiqing Zhao,Yujie Hu,Yujie Hu,Zhenzhen Yang,Hancheng Zheng,Ines Hellmann,Michael Inouye,John E. Pool,Xin Yi,Xin Yi,Jing Zhao,Jinjie Duan,Yan Zhou,Junjie Qin,Junjie Qin,Lijia Ma,Lijia Ma,Guoqing Li,Zhentao Yang,Guojie Zhang,Guojie Zhang,Bin Yang,Chang Yu,Fang Liang,Fang Liang,Wenjie Li,Shaochuan Li,Dawei Li,Peixiang Ni,Jue Ruan,Jue Ruan,Qibin Li,Qibin Li,Hongmei Zhu,Dongyuan Liu,Zhike Lu,Ning Li,Ning Li,Guangwu Guo,Guangwu Guo,Jianguo Zhang,Jia Ye,Lin Fang,Qin Hao,Qin Hao,Quan Chen,Quan Chen,Yu Liang,Yu Liang,Yeyang Su,Yeyang Su,A. san,A. san,Cuo Ping,Cuo Ping,Shuang Yang,Fang Chen,Fang Chen,Li Li,Ke Zhou,Hongkun Zheng,Hongkun Zheng,Yuanyuan Ren,Ling Yang,Yang Gao,Yang Gao,Guohua Yang,Guohua Yang,Zhuo Li,Xiaoli Feng,Karsten Kristiansen,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Rasmus Nielsen,Richard Durbin,Lars Bolund,Lars Bolund,Xiuqing Zhang,Xiuqing Zhang,Songgang Li,Songgang Li,Songgang Li,Huanming Yang,Huanming Yang,Jian Wang,Jian Wang +110 more
TL;DR: Genotyping analysis showed that SNP identification had high accuracy and consistency, indicating the high sequence quality of this assembly, and the potential usefulness of next-generation sequencing technologies for personal genomics.
Journal ArticleDOI
Comparative population genomics of maize domestication and improvement
Matthew B. Hufford,Xun Xu,Joost van Heerwaarden,Tanja Pyhäjärvi,Jer Ming Chia,Reed A. Cartwright,Robert J. Elshire,Jeffrey C. Glaubitz,Kate E. Guill,Kate E. Guill,Shawn M. Kaeppler,Jinsheng Lai,Peter L. Morrell,Laura M. Shannon,Chi Song,Nathan M. Springer,Ruth A. Swanson-Wagner,Peter Tiffin,Jun Wang,Gengyun Zhang,John Doebley,Michael D. McMullen,Michael D. McMullen,Doreen Ware,Doreen Ware,Edward S. Buckler,Edward S. Buckler,Shuang Yang,Jeffrey Ross-Ibarra +28 more
TL;DR: A comprehensive assessment of the evolution of modern maize based on the genome-wide resequencing of 75 wild, landrace and improved maize lines finds evidence of recovery of diversity after domestication, likely introgression from wild relatives, and evidence for stronger selection during domestication than improvement.
Journal ArticleDOI
Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization
Cheng Qin,Cheng Qin,Changshui Yu,Yaou Shen,Xiaodong Fang,Xiaodong Fang,Lang Chen,Jiumeng Min,Jiaowen Cheng,Shancen Zhao,Meng Xu,Yong Luo,Yulan Yang,Zhiming Wu,Likai Mao,Haiyang Wu,Changying Ling-Hu,Huangkai Zhou,Haijian Lin,Sandra Isabel González-Morales,Diana L. Trejo-Saavedra,Hao Tian,Xin Tang,Maojun Zhao,Zhiyong Huang,Anwei Zhou,Xiaoming Yao,Junjie Cui,Wenqi Li,Zhe Chen,Yongqiang Feng,Yongchao Niu,Shimin Bi,Xiuwei Yang,Weipeng Li,Huimin Cai,Xirong Luo,Salvador Montes-Hernández,Marco Antonio Leyva-González,Zhiqiang Xiong,Xiujing He,Lijun Bai,Shu Tan,Xiangqun Tang,Dan Liu,Jinwen Liu,Shangxing Zhang,Maoshan Chen,Lu Zhang,Lu Zhang,Li Zhang,Yinchao Zhang,Weiqin Liao,Yan Zhang,Min Wang,Xiaodan Lv,Bo Wen,Hongjun Liu,Hemi Luan,Yonggang Zhang,Shuang Yang,Xiaodian Wang,Jiaohui Xu,Xueqin Li,Shuai Cheng Li,Junyi Wang,Alain Palloix,Paul W. Bosland,Yingrui Li,Anders Krogh,Rafael F. Rivera-Bustamante,Luis Herrera-Estrella,Ye Yin,Jiping Yu,Kailin Hu,Zhiming Zhang +75 more
TL;DR: It is found that dosage compensation effect of tandem duplication genes probably contributed to the pungent diversification in pepper and the Capsicum reference genome provides crucial information for the study of not only the evolution of the pepper genome but also, the Solanaceae family.