Scottish Association for Marine Science

About: Scottish Association for Marine Science is a facility organization based out in Oban, United Kingdom. It is known for research contribution in the topics: Sea ice & Benthic zone. The organization has 524 authors who have published 1765 publications receiving 70783 citations. The organization is also known as: SAMS & Scottish Marine Station for Scientific Research.

Ecology of bathyal polychaete fauna at an Arctic-Atlantic boundary (Faroe-Shetland Channel, North-east Atlantic)

Abstract: By reference to a series of 15 sampling stations spanning the West Shetland Slope (150–1000 m; Faroe–Shetland Channel, North-east Atlantic) we examined the potential environmental controls on the standing stock, diversity and composition of the polychaete fauna. In contrast to the majority of studied bathyal environments, the Faroe–Shetland Channel has a highly complex and dynamic hydrographic regime, particularly notable for extreme thermal variability at mid-slope depths (i.e. 7°C range at ca. 500 m). Contrary to general expectation, polychaete biomass increased (rather than decreased) with depth. Species diversity exhibited a parabolic pattern with depth, maximum diversity occurring at depths of 350–550 m, rather shallower than observed in other bathyal studies, and possibly linked with a maximum in habitat temperature range. Multivariate analyses of faunal composition suggested a separation of the sampling stations into a shallower and a deeper group, with temperature exerting a major control on polyc...

Establishment of a cryopreserved biobank for the Culture Collection of Freshwater Microalgae (CCMA-UFSCar), São Paulo, Brazil

Abstract: The Culture Collection of Freshwater Microalgae (CCMA-UFSCar, Colecao de Culturas de Microalgas de Agua-Doce), based at the Universidade Federal de Sao Carlos, plays an important role in underpinning Brazilian microalgal research, providing biological materials, substrates and training personnel for a large proportion of the past and current projects in this area. However, recent efforts to expand the culture catalogue/holdings have reached a ceiling because of the logistical practicality of maintaining actively growing cultures. In order to reduce the costs associated with the maintenance regime of cultures, efforts were initiated on the establishment of a cryopreserved biobank for long term maintenance of cultures, thus minimizing the efforts associated with handling of material, as successfully frozen cultures, in theory, could be maintained effectively indefinitely, with the advantage of the stability of cells characteristics. Initial tests were performed on 93 strains including exemplar taxa across the different taxonomic groups in the collection catalogue. The highest levels of success were achieved for the smaller taxa, such as the small green algae; while for the larger and more complex organisms limited to no success was obtained. For the strains tested, over 70% had positive good levels of post-thaw viability and regenerated phenotypically normal cultures.

A molecular insight into algal-oomycete warfare: cDNA analysis of Ectocarpus siliculosus infected with the basal oomycete Eurychasma dicksonii.

Abstract: Brown algae are the predominant primary producers in coastal habitats, and like land plants are subject to disease and parasitism. Eurychasma dicksonii is an abundant, and probably cosmopolitan, obligate biotrophic oomycete pathogen of marine brown algae. Oomycetes (or water moulds) are pathogenic or saprophytic non-photosynthetic Stramenopiles, mostly known for causing devastating agricultural and aquacultural diseases. Whilst molecular knowledge is restricted to crop pathogens, pathogenic oomycetes actually infect hosts from most eukaryotic lineages. Molecular evidence indicates that Eu. dicksonii belongs to the most early-branching oomycete clade known so far. Therefore Eu. dicksonii is of considerable interest due to its presumed environmental impact and phylogenetic position. Here we report the first large scale functional molecular data acquired on the most basal oomycete to date. 9873 unigenes, totalling over 3.5Mb of sequence data, were produced from Sanger-sequenced and pyrosequenced EST libraries of infected Ectocarpus siliculosus. 6787 unigenes (70%) were of algal origin, and 3086 (30%) oomycete origin. 57% of Eu. dicksonii sequences had no similarity to published sequence data, indicating that this dataset is largely unique. We were unable to positively identify sequences belonging to the RXLR and CRN groups of oomycete effectors identified in higher oomycetes, however we uncovered other unique pathogenicity factors. These included putative algal cell wall degrading enzymes, cell surface proteins, and cyclophilin-like proteins. A first look at the host response to infection has also revealed movement of the host nucleus to the site of infection as well as expression of genes responsible for strengthening the cell wall, and secretion of proteins such as protease inhibitors. We also found evidence of transcriptional reprogramming of E. siliculosus transposable elements and of a viral gene inserted in the host genome.